title: Field-scale transplantation experiment to investigate structures of soil bacterial communities at pioneering sites.
abstract: Studies on the effect of environmental conditions on plants and microorganisms are a central issue in ecology, and they require an adequate experimental setup. A strategy often applied in geobotanical studies is based on the reciprocal transplantation of plant species at different sites. We adopted a similar approach as a field-based tool to investigate the relationships of soil bacterial communities with the environment. Soil samples from two different (calcareous and siliceous) unvegetated glacier forefields were reciprocally transplanted and incubated for 15 months between 2009 and 2010. Controls containing local soils were included. The sites were characterized over time in terms of geographical (bedrock, exposition, sunlight, temperature, and precipitation) and physicochemical (texture, water content, soluble and nutrients) features. The incubating local ("home") and transplanted ("away") soils were monitored for changes in extractable nutrients and in the bacterial community structure, defined through terminal restriction fragment length polymorphism (T-RFLP) of the 16S rRNA gene. Concentrations of soluble ions in most samples were more significantly affected by seasons than by the transplantation. For example, NO(3)(-) showed a seasonal pattern, increasing from 1 to 3 μg NO(3)(-) (g soil dry weight)(-1) after the melting of snow but decreasing to <1 μg NO(3)(-) (g soil dry weight)(-1) in autumn. Seasons, and in particular strong precipitation events occurring in the summer of 2010 (200 to 300 mm of rain monthly), were also related to changes of bacterial community structures. Our results show the suitability of this approach to compare responses of bacterial communities to different environmental conditions directly in the field.
authors.affiliation: Environmental Microbiology, Institute of Biogeochemistry and Pollutant Dynamics, ETH Zürich, Universitätstrasse 16, 8092 Zürich, Switzerland.
authors.forename: Anna
authors.initials: A
authors.lastname: Lazzaro
authors.forename: Andreas
authors.initials: A
authors.lastname: Gauer
authors.forename: Josef
authors.initials: J
authors.lastname: Zeyer
mesh_terms: D001419:Bacteria / Q000145:classification* / Q000235:genetics / Q000254:growth & development*; D044822:Biodiversity; D016000:Cluster Analysis; D016172:DNA Fingerprinting; D004269:DNA, Bacterial / Q000235:genetics; D004275:DNA, Ribosomal / Q000235:genetics; D005843:Geography; D007477:Ions / Q000032:analysis; D009566:Nitrates / Q000032:analysis; D012150:Polymorphism, Restriction Fragment Length; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012621:Seasons; D012987:Soil / Q000032:analysis; D012988:Soil Microbiology
chemical_list: D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D007477:Ions; D009566:Nitrates; D012336:RNA, Ribosomal, 16S; D012987:Soil