title: Direct measurement of the protein response to an electrostatic perturbation that mimics the catalytic cycle in ketosteroid isomerase.
abstract: Understanding how electric fields and their fluctuations in the active site of enzymes affect efficient catalysis represents a critical objective of biochemical research. We have directly measured the dynamics of the electric field in the active site of a highly proficient enzyme, Δ(5)-3-ketosteroid isomerase (KSI), in response to a sudden electrostatic perturbation that simulates the charge displacement that occurs along the KSI catalytic reaction coordinate. Photoexcitation of a fluorescent analog (coumarin 183) of the reaction intermediate mimics the change in charge distribution that occurs between the reactant and intermediate state in the steroid substrate of KSI. We measured the electrostatic response and angular dynamics of four probe dipoles in the enzyme active site by monitoring the time-resolved changes in the vibrational absorbance (IR) spectrum of a spectator thiocyanate moiety (a quantitative sensor of changes in electric field) placed at four different locations in and around the active site, using polarization-dependent transient vibrational Stark spectroscopy. The four different dipoles in the active site remain immobile and do not align to the changes in the substrate electric field. These results indicate that the active site of KSI is preorganized with respect to functionally relevant changes in electric fields.
authors.affiliation: Department of Chemistry, and PULSE Institute, SLAC National Accelerator Laboratory, Stanford University, Stanford, CA 94305, USA.
authors.forename: Santosh Kumar
authors.initials: SK
authors.lastname: Jha
authors.forename: Minbiao
authors.initials: M
authors.lastname: Ji
authors.forename: Kelly J
authors.initials: KJ
authors.lastname: Gaffney
authors.forename: Steven G
authors.initials: SG
authors.lastname: Boxer
mesh_terms: D002384:Catalysis; D020134:Catalytic Domain / Q000235:genetics*; D002942:Circular Dichroism; D013058:Mass Spectrometry; D008958:Models, Molecular; D020125:Mutation, Missense / Q000235:genetics; D016958:Pseudomonas putida / Q000201:enzymology*; D013050:Spectrometry, Fluorescence; D017550:Spectroscopy, Fourier Transform Infrared; D055672:Static Electricity; D013251:Steroid Isomerases / Q000737:chemistry / Q000378:metabolism*
chemical_list: D013251:Steroid Isomerases; C022660:steroid delta-isomerase