title: Expression analysis of a heat-inducible, Myo-inositol-1-phosphate synthase (MIPS) gene from wheat and the alternatively spliced variants of rice and Arabidopsis.
abstract: Molecular dissection and a deeper analysis of the heat stress response mechanism in wheat have been poorly understood so far. This study delves into the molecular basis of action of TaMIPS, a heat stress-inducible enzyme that was identified through PCR-select subtraction technology, which is named here as TaMIPS2. MIPS (L-Myo-inositol-phosphate synthase) is important for the normal growth and development in plants. Expression profiling showed that TaMIPS2 is expressed during different developing seed stages upon heat stress. Also, the transcript levels increase in unfertilized ovaries and significant amounts are present during the recovery period providing evidence that MIPS is crucial for its role in heat stress recovery and flower development. Alternatively spliced forms from rice and Arabidopsis were also identified and their expression analysis revealed that apart from heat stress, some of the spliced variants were also inducible by drought, NaCl, Cold, ABA, BR, SA and mannitol. In silico promoter analysis revealed various cis-elements that could contribute for the differential regulation of MIPS in different plant systems. Phylogenetic analysis indicated that MIPS are highly conserved among monocots and dicots and TaMIPS2 grouped specifically with monocots. Comparative analyses was undertaken by different experimental approaches, i.e., semi-quantitative RT-PCR, quantitative RT-PCR, Genevestigator as a reference expression tool and motif analysis to predict the possible function of TaMIPS2 in regulating the different aspects of plant development under abiotic stress in wheat.
authors.affiliation: Department of Plant Molecular Biology, University of Delhi, New Delhi, India.
authors.forename: Neetika
authors.initials: N
authors.lastname: Khurana
authors.forename: Harsh
authors.initials: H
authors.lastname: Chauhan
authors.forename: Paramjit
authors.initials: P
authors.lastname: Khurana
mesh_terms: D000040:Abscisic Acid / Q000494:pharmacology; D017398:Alternative Splicing; D017360:Arabidopsis / Q000201:enzymology* / Q000235:genetics; D003080:Cold Temperature; D055864:Droughts; D015971:Gene Expression Regulation, Enzymologic; D018506:Gene Expression Regulation, Plant / Q000187:drug effects; D006358:Hot Temperature; D008353:Mannitol / Q000494:pharmacology; D007296:Myo-Inositol-1-Phosphate Synthase / Q000235:genetics* / Q000378:metabolism; D012275:Oryza / Q000201:enzymology* / Q000235:genetics; D010802:Phylogeny; D011401:Promoter Regions, Genetic; D012965:Sodium Chloride / Q000494:pharmacology; D014908:Triticum / Q000201:enzymology* / Q000235:genetics / Q000254:growth & development
chemical_list: D008353:Mannitol; D012965:Sodium Chloride; D000040:Abscisic Acid; D007296:Myo-Inositol-1-Phosphate Synthase