title: Knime4Bio: a set of custom nodes for the interpretation of next-generation sequencing data with KNIME.
abstract: Analysing large amounts of data generated by next-generation sequencing (NGS) technologies is difficult for researchers or clinicians without computational skills. They are often compelled to delegate this task to computer biologists working with command line utilities. The availability of easy-to-use tools will become essential with the generalization of NGS in research and diagnosis. It will enable investigators to handle much more of the analysis. Here, we describe Knime4Bio, a set of custom nodes for the KNIME (The Konstanz Information Miner) interactive graphical workbench, for the interpretation of large biological datasets. We demonstrate that this tool can be utilized to quickly retrieve previously published scientific findings.
authors: Institut du thorax, Inserm UMR 915, Centre Hospitalier Universitaire de Nantes, 44000 Nantes, France.
authors: Pierre
authors: P
authors: Lindenbaum
authors: Solena
authors: S
authors: Le Scouarnec
authors: Vincent
authors: V
authors: Portero
authors: Richard
authors: R
authors: Redon
mesh_terms: D031845:Hajdu-Cheney Syndrome / Q000235:genetics; D059014:High-Throughput Nucleotide Sequencing / Q000379:methods*; D006801:Humans; D012984:Software