title: Characterization of a Basidiomycete fungus from stored sugar beet roots.
abstract: Eighteen isolates from sugar beet roots associated with an unknown etiology were characterized based on observations of morphological characters, hyphal growth at 4-28 C, production of phenol oxidases and sequence analysis of internal transcribed spacer (ITS) and large subunit (LSU) regions of the ribosomal DNA (rDNA). The isolates did not produce asexual or sexual spores, had binucleate hyphal cells with clamp connections, grew 4-22 C with estimated optimal growth at 14.5 C and formed a dark brown pigment on potato dextrose or malt extract agar amended with 0.5% tannic acid. Color changes observed when solutions of gum guiac, guiacol and syringaldzine were applied directly to mycelium grown on these media indicated that all isolates produced phenol oxidases. Sequences of ITS and LSU regions on the rDNA gene from 15 isolates were 99.2-100% identical, and analysis of sequence data with maximum likelihood and maximum parsimony suggest that the isolates from sugar beet roots are phylogenetically related to Athelia bombacina, Granulobasidium vellereum and Cyphella digitalis. High statistical support for both loci under different criteria confirmed that Athelia bombacina was consistently the closest known relative to the sugar beet isolates. Additional taxonomic investigations are needed before species can be clarified and designated for these isolates.
authors: Department of Bioresource Sciences, Akita Prefectural University, Akita, Japan. ttoda@akita-pu.ac.jp
authors: Takeshi
authors: T
authors: Toda
authors: Carl A
authors: CA
authors: Strausbaugh
authors: Marianela
authors: M
authors: Rodriguez-Carres
authors: Marc A
authors: MA
authors: Cubeta
mesh_terms: D001483:Base Sequence; D001487:Basidiomycota / Q000145:classification* / Q000201:enzymology / Q000235:genetics / Q000302:isolation & purification*; D027461:Beta vulgaris / Q000382:microbiology*; D003470:Culture Media; D004271:DNA, Fungal / Q000235:genetics; D021903:DNA, Ribosomal Spacer / Q000235:genetics; D061353:Food Storage; D025301:Hyphae / Q000254:growth & development; D007061:Idaho; D008969:Molecular Sequence Data; D014442:Monophenol Monooxygenase / Q000378:metabolism; D025282:Mycelium / Q000254:growth & development; D010802:Phylogeny; D018517:Plant Roots / Q000382:microbiology; D017422:Sequence Analysis, DNA
chemical_list: D003470:Culture Media; D004271:DNA, Fungal; D021903:DNA, Ribosomal Spacer; D014442:Monophenol Monooxygenase