title: Gene Expression Atlas update--a value-added database of microarray and sequencing-based functional genomics experiments.
abstract: Gene Expression Atlas (http://www.ebi.ac.uk/gxa) is an added-value database providing information about gene expression in different cell types, organism parts, developmental stages, disease states, sample treatments and other biological/experimental conditions. The content of this database derives from curation, re-annotation and statistical analysis of selected data from the ArrayExpress Archive and the European Nucleotide Archive. A simple interface allows the user to query for differential gene expression either by gene names or attributes or by biological conditions, e.g. diseases, organism parts or cell types. Since our previous report we made 20 monthly releases and, as of Release 11.08 (August 2011), the database supports 19 species, which contains expression data measured for 19,014 biological conditions in 136,551 assays from 5598 independent studies.
authors: European Bioinformatics Institute, EMBL, Hinxton, UK and Dana-Farber Cancer Institute, Boston, MA, USA.
authors: Misha
authors: M
authors: Kapushesky
authors: Tomasz
authors: T
authors: Adamusiak
authors: Tony
authors: T
authors: Burdett
authors: Aedin
authors: A
authors: Culhane
authors: Anna
authors: A
authors: Farne
authors: Alexey
authors: A
authors: Filippov
authors: Ele
authors: E
authors: Holloway
authors: Andrey
authors: A
authors: Klebanov
authors: Nataliya
authors: N
authors: Kryvych
authors: Natalja
authors: N
authors: Kurbatova
authors: Pavel
authors: P
authors: Kurnosov
authors: James
authors: J
authors: Malone
authors: Olga
authors: O
authors: Melnichuk
authors: Robert
authors: R
authors: Petryszak
authors: Nikolay
authors: N
authors: Pultsin
authors: Gabriella
authors: G
authors: Rustici
authors: Andrew
authors: A
authors: Tikhonov
authors: Ravensara S
authors: RS
authors: Travillian
authors: Eleanor
authors: E
authors: Williams
authors: Andrey
authors: A
authors: Zorin
authors: Helen
authors: H
authors: Parkinson
authors: Alvis
authors: A
authors: Brazma
mesh_terms: D001271:Atlases as Topic; D030541:Databases, Genetic; D020869:Gene Expression Profiling; D023281:Genomics; D006801:Humans; D035683:MicroRNAs / Q000378:metabolism; D058977:Molecular Sequence Annotation; D020411:Oligonucleotide Array Sequence Analysis; D017423:Sequence Analysis, RNA; D014584:User-Computer Interface
chemical_list: D035683:MicroRNAs