title: InterPro in 2011: new developments in the family and domain prediction database.
abstract: InterPro (http://www.ebi.ac.uk/interpro/) is a database that integrates diverse information about protein families, domains and functional sites, and makes it freely available to the public via Web-based interfaces and services. Central to the database are diagnostic models, known as signatures, against which protein sequences can be searched to determine their potential function. InterPro has utility in the large-scale analysis of whole genomes and meta-genomes, as well as in characterizing individual protein sequences. Herein we give an overview of new developments in the database and its associated software since 2009, including updates to database content, curation processes and Web and programmatic interfaces.
authors.affiliation: EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD Cambridge, UK. hunter@ebi.ac.uk
authors.forename: Sarah
authors.initials: S
authors.lastname: Hunter
authors.forename: Philip
authors.initials: P
authors.lastname: Jones
authors.forename: Alex
authors.initials: A
authors.lastname: Mitchell
authors.forename: Rolf
authors.initials: R
authors.lastname: Apweiler
authors.forename: Teresa K
authors.initials: TK
authors.lastname: Attwood
authors.forename: Alex
authors.initials: A
authors.lastname: Bateman
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authors.initials: T
authors.lastname: Bernard
authors.forename: David
authors.initials: D
authors.lastname: Binns
authors.forename: Peer
authors.initials: P
authors.lastname: Bork
authors.forename: Sarah
authors.initials: S
authors.lastname: Burge
authors.forename: Edouard
authors.initials: E
authors.lastname: de Castro
authors.forename: Penny
authors.initials: P
authors.lastname: Coggill
authors.forename: Matthew
authors.initials: M
authors.lastname: Corbett
authors.forename: Ujjwal
authors.initials: U
authors.lastname: Das
authors.forename: Louise
authors.initials: L
authors.lastname: Daugherty
authors.forename: Lauranne
authors.initials: L
authors.lastname: Duquenne
authors.forename: Robert D
authors.initials: RD
authors.lastname: Finn
authors.forename: Matthew
authors.initials: M
authors.lastname: Fraser
authors.forename: Julian
authors.initials: J
authors.lastname: Gough
authors.forename: Daniel
authors.initials: D
authors.lastname: Haft
authors.forename: Nicolas
authors.initials: N
authors.lastname: Hulo
authors.forename: Daniel
authors.initials: D
authors.lastname: Kahn
authors.forename: Elizabeth
authors.initials: E
authors.lastname: Kelly
authors.forename: Ivica
authors.initials: I
authors.lastname: Letunic
authors.forename: David
authors.initials: D
authors.lastname: Lonsdale
authors.forename: Rodrigo
authors.initials: R
authors.lastname: Lopez
authors.forename: Martin
authors.initials: M
authors.lastname: Madera
authors.forename: John
authors.initials: J
authors.lastname: Maslen
authors.forename: Craig
authors.initials: C
authors.lastname: McAnulla
authors.forename: Jennifer
authors.initials: J
authors.lastname: McDowall
authors.forename: Conor
authors.initials: C
authors.lastname: McMenamin
authors.forename: Huaiyu
authors.initials: H
authors.lastname: Mi
authors.forename: Prudence
authors.initials: P
authors.lastname: Mutowo-Muellenet
authors.forename: Nicola
authors.initials: N
authors.lastname: Mulder
authors.forename: Darren
authors.initials: D
authors.lastname: Natale
authors.forename: Christine
authors.initials: C
authors.lastname: Orengo
authors.forename: Sebastien
authors.initials: S
authors.lastname: Pesseat
authors.forename: Marco
authors.initials: M
authors.lastname: Punta
authors.forename: Antony F
authors.initials: AF
authors.lastname: Quinn
authors.forename: Catherine
authors.initials: C
authors.lastname: Rivoire
authors.forename: Amaia
authors.initials: A
authors.lastname: Sangrador-Vegas
authors.forename: Jeremy D
authors.initials: JD
authors.lastname: Selengut
authors.forename: Christian J A
authors.initials: CJ
authors.lastname: Sigrist
authors.forename: Maxim
authors.initials: M
authors.lastname: Scheremetjew
authors.forename: John
authors.initials: J
authors.lastname: Tate
authors.forename: Manjulapramila
authors.initials: M
authors.lastname: Thimmajanarthanan
authors.forename: Paul D
authors.initials: PD
authors.lastname: Thomas
authors.forename: Cathy H
authors.initials: CH
authors.lastname: Wu
authors.forename: Corin
authors.initials: C
authors.lastname: Yeats
authors.forename: Siew-Yit
authors.initials: SY
authors.lastname: Yong
mesh_terms: D030562:Databases, Protein; D017434:Protein Structure, Tertiary; D011506:Proteins / Q000145:classification* / Q000502:physiology; D020539:Sequence Analysis, Protein; D012984:Software; D009626:Terminology as Topic; D014584:User-Computer Interface
chemical_list: D011506:Proteins
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