title: Intracellular Copper Zinc Superoxide dismutase (icCuZnSOD) from Asian seabass (Lates calcarifer): molecular cloning, characterization and gene expression with reference to Vibrio anguillarum infection.
abstract: Copper Zinc Superoxide dismutase (CuZnSOD) is the family of most important antioxidant metalloenzymes that protects tissues from damage by reactive oxygen species (ROS). In the present study, the intracellular copper zinc SOD from the Asian seabass Lates calcarifer (Lc-icCuZnSOD) was identified by RNA ligase mediated rapid amplification of cDNA ends (RLM-RACE) technique. The full-length cDNA of Lc-icCuZnSOD consisted of 809 nucleotides with an open-reading frame of 465 bp encoding 154 amino acids and N-Glycosylation site (NVTA) within. The predicted molecular mass of the protein is 15.84 kDa with an estimated pI of 5.52. The deduced amino acid sequence of Lc-icCuZnSOD shared high degree of homology with known CuZnSODs from other species. CuZn binding sites (H47, H49, H64, and H121 for Cu(2+) and H72, H81, and ASP84 for Zn(2+)), two cysteine residues (aa 58 and 147) that form a disulfide bond, and CuZnSOD family signature sequences (GFHVHAFGDNT, aa 45-55 and GNAGGRLACGVI, aa 139-150) were highly conserved among fish species. Temporal and tissue specific expression of Lc-icCuZnSOD was significantly differentially altered in Asian seabass challenged with Vibrio anguillarum indicating possible role in antioxidant activities involved in the innate immune defense mechanisms.
authors.affiliation: Department of Biotechnology, Rajalakshmi Engineering College, Thandalam, Chennai 602105, Tamil Nadu, India. florachakravarthy@gmail.com
authors.forename: Nallathambi
authors.initials: N
authors.lastname: Chakravarthy
authors.forename: Kalyanasundaram
authors.initials: K
authors.lastname: Aravindan
authors.forename: Natarajan
authors.initials: N
authors.lastname: Kalaimani
authors.forename: Shankar Vinayakarao
authors.initials: SV
authors.lastname: Alavandi
authors.forename: Modem
authors.initials: M
authors.lastname: Poornima
authors.forename: Thairiyam Chinnappan
authors.initials: TC
authors.lastname: Santiago
mesh_terms: D000818:Animals; D001492:Bass / Q000235:genetics / Q000378:metabolism*; D003001:Cloning, Molecular; D008958:Models, Molecular; D009928:Organ Specificity; D013482:Superoxide Dismutase / Q000737:chemistry* / Q000235:genetics*; D014733:Vibrio; D014735:Vibrio Infections / Q000235:genetics*
chemical_list: D013482:Superoxide Dismutase