title: Molecular cloning and expression of the col2a1a and col2a1b genes in the medaka, Oryzias latipes.
abstract: The Col2a1 gene is expressed in notochord, otic vesicle, cartilaginous tissue and the anlage of endochondral bone during development in higher vertebrates. Type II collagen, a homotrimeric product of the Col2a1 gene, functions as a key regulatory protein for cartilage development and endochondral ossification. In medaka and zebrafish, a single homolog of the col2a1 gene has been identified. However, it is necessary to note that many genes are duplicated in teleost fishes. To clarify function of col2a1 genes in teleost fishes and to further understand the process of cartilage development and endochondral ossification, we cloned and mapped the gene loci of two col2a1 orthologs in medaka. The proteins encoded by both medaka col2a1a and col2a1b genes were highly conserved (85.3% and 82.6%) relative to human COL2A1, but synteny was not observed. We also examined the expression patterns of col2a1a and col2a1b during embryonic development. Whole-mount insitu hybridization data suggests that expression patterns of both medaka co2a1a and col2a1b genes are similar to that of zebrafish co2a1 in the early embryonic stages. In medaka, the two col2a1 genes show a closely correlated pattern of spatial and temporal expression. In late embryonic stages, however, there were differences in both expression patterns in the pectoral fin. This study is the first report of two homologs of col2a1 in teleosts and also the first examination of col2a1a and col2a1b expression patterns in this group.
authors: Health Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), 3-11-46 Nakouji, Amagasaki, Hyogo 661-0974, Japan.
authors: Tomohiro
authors: T
authors: Matsumoto
authors: Tomonori
authors: T
authors: Deguchi
authors: Takashi
authors: T
authors: Kawasaki
authors: Shunsuke
authors: S
authors: Yuba
authors: Junichi
authors: J
authors: Sato
mesh_terms: D000595:Amino Acid Sequence; D058500:Animal Fins / Q000166:cytology / Q000378:metabolism; D000818:Animals; D002874:Chromosome Mapping; D003001:Cloning, Molecular; D024043:Collagen Type II / Q000235:genetics / Q000378:metabolism*; D004625:Embryo, Nonmammalian / Q000166:cytology / Q000378:metabolism; D047108:Embryonic Development; D029941:Fish Proteins / Q000235:genetics / Q000378:metabolism*; D018507:Gene Expression Regulation, Developmental; D056426:Genetic Loci; D006801:Humans; D008969:Molecular Sequence Data; D009990:Oryzias / Q000196:embryology / Q000235:genetics* / Q000378:metabolism; D012333:RNA, Messenger / Q000235:genetics / Q000378:metabolism; D017386:Sequence Homology, Amino Acid; D026801:Synteny
chemical_list: C499177:COL2A1 protein, human; D024043:Collagen Type II; D029941:Fish Proteins; D012333:RNA, Messenger