title: A novel optical thrombin aptasensor based on magnetic nanoparticles and split DNAzyme.
abstract: In this paper, we report a novel and sensitive optical sensing protocol for thrombin detection based on magnetic nanoparticles (MNPs) and thrombin aptamer, employing split HRP-mimicking DNAzyme halves as its sensing element, which can catalyze the H(2)O(2)-mediated oxidation of the colorless ABTS into a blue-green product. A single nucleotide containing the recognition element and sensing element is utilized in our protocol. The specific recognition of thrombin and its aptamer leads to the structure deformation of the DNA strands and causes the split of the DNAzyme halves. Therefore, the decrease of absorption spectra can be recorded by the UV-visible Spectrophotometer. DNA-coated MNPs are utilized to separate the interferential materials from the analyst, thus making this assay can be applied in the detection of thrombin in complex samples, such as human plasma. This original, sensitive and cost-effective assay showed favorable recognition for thrombin. The absorbance signals with the concentration of thrombin over a range from 0.5 to 20 nM and the detection limit of thrombin was 0.5 nM. The controlled experiments showed that thrombin signal was not interfered in the presence of other co-existence proteins.
authors.affiliation: Department of Chemistry, East China Normal University, Shanghai, PR China.
authors.forename: Dan
authors.initials: D
authors.lastname: Zhu
authors.forename: Juanjuan
authors.initials: J
authors.lastname: Luo
authors.forename: Xinyi
authors.initials: X
authors.lastname: Rao
authors.forename: Jiajia
authors.initials: J
authors.lastname: Zhang
authors.forename: Guifang
authors.initials: G
authors.lastname: Cheng
authors.forename: Pingang
authors.initials: P
authors.lastname: He
authors.forename: Yuzhi
authors.initials: Y
authors.lastname: Fang
mesh_terms: D052157:Aptamers, Nucleotide / Q000032:analysis* / Q000737:chemistry; D021881:DNA, Catalytic / Q000737:chemistry*; D006801:Humans; D057230:Limit of Detection; D008280:Magnetics; D008958:Models, Molecular; D053758:Nanoparticles / Q000737:chemistry*; D013917:Thrombin / Q000032:analysis* / Q000737:chemistry
chemical_list: D052157:Aptamers, Nucleotide; D021881:DNA, Catalytic; C081676:thrombin aptamer; D013917:Thrombin