title: High genetic diversity in wild culinary-medicinal wood ear mushroom, Auricularia polytricha (Mont.) Sacc., in tropical China revealed by ISSR analysis.
abstract: The genetic diversity of 40 wild Auricularia polytricha strains within ten natural populations in tropical China and five cultivated strains were analyzed by using twelve inter-simple sequence repeat (ISSR) primers. At the species level, the percentage of polymorphic loci (P) = 99.8%, the effective number of alleles (Ne) = 1.3569, Nei's gene diversity (H) = 0.2398, Shannon information index (I) = 0.3896, and total genetic diversity (Ht)= 0.2346 indicate a high level of genetic diversity in wild A. polytricha. At the population level of the wild fungus, P = 43.51%, Ne = 1.2675, H = 0.1702, I = 0.2504. However, the genetic diversity of cultivated strains was the lowest of all populations (Ne = 1.1584, H = 0.0940, I = 0.1440). A moderate degree of genetic differentiation (G(st) = 0.347) among the sampled wild populations was detected based on Nei's gene diversity analysis, suggesting that 65.3% of variation existed within this population. The high genetic variation level within wild populations may mostly result from a low level of gene flow (N = 0.9408) and random genetic drift.
authors.affiliation: Institute of Microbiology, P.O. Box 61, Beijing Forestry University, Beijing 100083, China.
authors.forename: Ping
authors.initials: P
authors.lastname: Du
authors.forename: Bao-Kai
authors.initials: BK
authors.lastname: Cui
authors.forename: Yu-Cheng
authors.initials: YC
authors.lastname: Dai
mesh_terms: D001487:Basidiomycota / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification; D002681:China; D016000:Cluster Analysis; D004271:DNA, Fungal / Q000235:genetics; D056426:Genetic Loci / Q000235:genetics; D005819:Genetic Markers / Q000235:genetics; D014644:Genetic Variation / Q000235:genetics*; D005828:Genetics, Population / Q000145:classification; D018895:Microsatellite Repeats / Q000235:genetics*; D016133:Polymerase Chain Reaction; D014329:Tropical Climate
chemical_list: D004271:DNA, Fungal; D005819:Genetic Markers