title: Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data.
abstract: BACKGROUND
  High-throughput sequencing (HTS) technologies have made low-cost sequencing of large numbers of samples commonplace. An explosion in the type, not just number, of sequencing experiments has also taken place including genome re-sequencing, population-scale variation detection, whole transcriptome sequencing and genome-wide analysis of protein-bound nucleic acids.
  
  
  RESULTS
  We present Artemis as a tool for integrated visualization and computational analysis of different types of HTS datasets in the context of a reference genome and its corresponding annotation.
  
  
  BACKGROUND
  Artemis is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute websites: http://www.sanger.ac.uk/resources/software/artemis/.
authors.affiliation: Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. artemis@sanger.ac.uk
authors.forename: Tim
authors.initials: T
authors.lastname: Carver
authors.forename: Simon R
authors.initials: SR
authors.lastname: Harris
authors.forename: Matthew
authors.initials: M
authors.lastname: Berriman
authors.forename: Julian
authors.initials: J
authors.lastname: Parkhill
authors.forename: Jacqueline A
authors.initials: JA
authors.lastname: McQuillan
mesh_terms: D016678:Genome; D059014:High-Throughput Nucleotide Sequencing; D058977:Molecular Sequence Annotation; D012984:Software; D059467:Transcriptome