title: Estimation of axon counts in a rat model of glaucoma: comparison of fixed-pattern sampling with targeted sampling.
abstract: BACKGROUND
  Full axon counting of optic nerve cross-sections represents the most accurate method to quantify axonal damage, but such analysis is very labour intensive. Recently, a new method has been developed, termed targeted sampling, which combines the salient features of a grading scheme with axon counting. Preliminary findings revealed the method compared favourably with random sampling. The aim of the current study was to advance our understanding of the effect of sampling patterns on axon counts by comparing estimated axon counts from targeted sampling with those obtained from fixed-pattern sampling in a large collection of optic nerves with different severities of axonal injury.
  
  
  METHODS
  Chronic ocular hypertension was induced in adult Sprague-Dawley rats for 1-7 weeks by translimbal laser photocoagulation of the trabecular meshwork. Axonal damage on resin-embedded cross-sections was estimated using three different methods: (i) semi-quantitative damage grading; (ii) semi-quantitative, automated axon counting using targeted sampling; and (iii) semi-quantitative, automated axon counting using fixed-pattern sampling.
  
  
  RESULTS
  Estimated axon counts, as generated by targeted sampling and fixed-pattern sampling, correlated equally well with the semi-quantitative grading scheme. Estimated counts obtained with targeted sampling were not statistically different from those yielded by fixed-pattern sampling. Bland-Altman analysis showed a good agreement between the two methods.
  
  
  CONCLUSIONS
  The results of our study validate the use of both fixed-pattern sampling and targeted sampling for estimation of axonal damage but do not indicate that the latter method is superior for detection of axon loss in animals with minor damage.
authors.affiliation: Ophthalmic Research Laboratories, South Australian Institute of Ophthalmology, Hanson Institute Centre for Neurological Diseases, Frome Road, Adelaide, SA 5000, Australia.
authors.forename: Andreas
authors.initials: A
authors.lastname: Ebneter
authors.forename: Robert J
authors.initials: RJ
authors.lastname: Casson
authors.forename: John Pm
authors.initials: JP
authors.lastname: Wood
authors.forename: Glyn
authors.initials: G
authors.lastname: Chidlow
mesh_terms: D000818:Animals; D001369:Axons / Q000473:pathology*; D002452:Cell Count; D004195:Disease Models, Animal; D005901:Glaucoma / Q000473:pathology*; D007429:Intraocular Pressure; D017075:Laser Coagulation; D009798:Ocular Hypertension / Q000473:pathology; D009901:Optic Nerve Diseases / Q000473:pathology*; D051381:Rats; D017207:Rats, Sprague-Dawley; D014129:Trabecular Meshwork / Q000601:surgery