title: Metabolomics protocols for filamentous fungi.
abstract: Proteomics and transcriptomics are established functional genomics tools commonly used to study filamentous fungi. Metabolomics has recently emerged as another option to complement existing techniques and provide detailed information on metabolic regulation and secondary metabolism. Here, we describe broad generic protocols that can be used to undertake metabolomics studies in filamentous fungi.
authors.affiliation: Australian Centre for Necrotrophic Fungal Pathogens, SABC, Murdoch University, Murdoch, Australia.
authors.forename: Joel P A
authors.initials: JP
authors.lastname: Gummer
authors.forename: Christian
authors.initials: C
authors.lastname: Krill
authors.forename: Lauren
authors.initials: L
authors.lastname: Du Fall
authors.forename: Ormonde D C
authors.initials: OD
authors.lastname: Waters
authors.forename: Robert D
authors.initials: RD
authors.lastname: Trengove
authors.forename: Richard P
authors.initials: RP
authors.lastname: Oliver
authors.forename: Peter S
authors.initials: PS
authors.lastname: Solomon
mesh_terms: D002853:Chromatography, Liquid / Q000379:methods; D005658:Fungi / Q000378:metabolism*; D008401:Gas Chromatography-Mass Spectrometry / Q000379:methods; D055442:Metabolome; D055432:Metabolomics / Q000379:methods*; D019906:Nuclear Magnetic Resonance, Biomolecular / Q000379:methods; D052616:Solid Phase Extraction / Q000379:methods; D049490:Systems Biology / Q000379:methods