title: Japanese encephalitis virus genotype replacement, Taiwan, 2009-2010.
abstract: Genotype I of Japanese encephalitis virus first appeared in Taiwan in 2008. Phylogenetic analysis of 37 viruses from pig farms in 2009-2010 classified these viruses into 2 unique subclusters of genotype I viruses and suggested multiple introductions and swift replacement of genotype III by genotype I virus in Taiwan.
authors.affiliation: National Chung Hsing University, Taichung, Taiwan.
authors.forename: Yi-Ying
authors.initials: YY
authors.lastname: Chen
authors.forename: Yi-Chin
authors.initials: YC
authors.lastname: Fan
authors.forename: Wu-Chun
authors.initials: WC
authors.lastname: Tu
authors.forename: Rey-Yi
authors.initials: RY
authors.lastname: Chang
authors.forename: Chen-Chang
authors.initials: CC
authors.lastname: Shih
authors.forename: In-Houng
authors.initials: IH
authors.lastname: Lu
authors.forename: Maw-Shien
authors.initials: MS
authors.lastname: Chien
authors.forename: Wei-Cheng
authors.initials: WC
authors.lastname: Lee
authors.forename: Ter-Hsin
authors.initials: TH
authors.lastname: Chen
authors.forename: Gwong-Jen
authors.initials: GJ
authors.lastname: Chang
authors.forename: Shyan-Song
authors.initials: SS
authors.lastname: Chiou
mesh_terms: D000818:Animals; D001483:Base Sequence; D021821:Communicable Diseases, Emerging / Q000453:epidemiology / Q000662:veterinary / Q000821:virology; D003465:Culex / Q000821:virology; D004279:DNA, Viral / Q000235:genetics; D004664:Encephalitis Virus, Japanese / Q000145:classification* / Q000235:genetics* / Q000302:isolation & purification; D004672:Encephalitis, Japanese / Q000453:epidemiology / Q000662:veterinary* / Q000821:virology; D005838:Genotype; D007303:Insect Vectors / Q000821:virology; D017720:Molecular Epidemiology; D010802:Phylogeny; D034421:Sus scrofa / Q000821:virology; D013552:Swine; D013553:Swine Diseases / Q000453:epidemiology / Q000821:virology*; D013624:Taiwan / Q000453:epidemiology
chemical_list: D004279:DNA, Viral