Thermotomaculum hydrothermale gen. nov., sp. nov., a novel heterotrophic thermophile within the phylum Acidobacteria from a deep-sea hydrothermal vent chimney in the Southern Okinawa Trough.
A novel heterotrophic, thermophilic bacterium, designated strain AC55(T), was isolated from a deep-sea hydrothermal vent chimney at the Hatoma Knoll in the Okinawa Trough, Japan. Cells of strain AC55(T) were non-motile, long rods (2.0- to 6.8-μm long and 0.3- to 0.6-μm wide). The strain was an obligatory anaerobic heterotroph capable of fermentative growth on complex proteinaceous substances. Elemental sulfur was reduced to hydrogen sulfide but did not stimulate growth. Growth was observed between 37 and 60°C (optimum 55°C), pH 5.5 and 8.5 (optimum pH 6.6), and in the presence of 1.5-4.5% (w/v) NaCl (optimum 2.5%, w/v). Menaquinone-7 and -8 were the major respiratory quinones. The G + C content of the genomic DNA from strain AC55(T) was 51.6 mol%. The 16S rRNA gene sequence analysis revealed that strain AC55(T) was the first cultivated representative of Acidobacteria subdivision 10. Based on the physiological and phylogenetic features of the novel isolate, the genus name Thermotomaculum gen. nov. is proposed, with Thermotomaculum hydrothermale sp. nov. as the type species. The type strain is AC55(T) (=JCM 17643(T) = DSM 24660(T) = NBRC 107904(T)).
Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho, Hakodate, 041-8611, Japan.
Hiroshi
H
Izumi
Takuro
T
Nunoura
Masayuki
M
Miyazaki
Sayaka
S
Mino
Tomohiro
T
Toki
Ken
K
Takai
Yoshihiko
Y
Sako
Tomoo
T
Sawabe
Satoshi
S
Nakagawa
D061271:Acidobacteria / Q000235:genetics* / Q000378:metabolism*; D001482:Base Composition; D004247:DNA / Q000737:chemistry; D004269:DNA, Bacterial / Q000235:genetics; D005285:Fermentation; D015964:Gene Expression Regulation, Bacterial; D006862:Hydrogen Sulfide / Q000737:chemistry; D006863:Hydrogen-Ion Concentration; D060086:Hydrothermal Vents; D007564:Japan; D016013:Likelihood Functions; D008055:Lipids / Q000737:chemistry; D008853:Microscopy / Q000379:methods; D008854:Microscopy, Electron / Q000379:methods; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000737:chemistry / Q000235:genetics; D012965:Sodium Chloride / Q000737:chemistry; D013696:Temperature; D024482:Vitamin K 2 / Q000737:chemistry
D004269:DNA, Bacterial; D008055:Lipids; D012336:RNA, Ribosomal, 16S; D024482:Vitamin K 2; D012965:Sodium Chloride; D004247:DNA; D006862:Hydrogen Sulfide