Complete nucleotide sequences and genome organization of a cherry isolate of cherry leaf roll virus.
The complete nucleotide sequence of cherry leaf roll virus (CLRV, genus Nepovirus) from a naturally infected cherry tree (Prunus avium cv. Bing) in North America was determined. RNA1 and RNA2 consist of 7,893 and 6,492 nucleotides, respectively, plus a poly-(A) tail. Each RNA encodes a single potential open reading frame. The first 657 nucleotides of RNA1 and RNA2 are 99% identical and include the 5'-UTR and the first 214 deduced amino acids of the polyproteins following the first of two in-frame start codons. Phylogenetic analysis reveals close relationships between CLRV and members of subgroup C of the genus Nepovirus.
Department of Plant Pathology, Washington State University-I.A.R.E.C., 24106 North Bunn Road, Prosser, WA 99350, USA. keastwell@wsu.edu
Kenneth C
KC
Eastwell
Tefera A
TA
Mekuria
Keri L
KL
Druffel
D020121:5' Untranslated Regions; D016000:Cluster Analysis; D023061:Gene Order; D016679:Genome, Viral; D008969:Molecular Sequence Data; D017860:Nepovirus / Q000235:genetics* / Q000302:isolation & purification*; D009656:North America; D016366:Open Reading Frames; D010802:Phylogeny; D010935:Plant Diseases / Q000821:virology*; D027861:Prunus / Q000821:virology*; D012367:RNA, Viral / Q000235:genetics*; D017422:Sequence Analysis, DNA; D012689:Sequence Homology, Nucleic Acid
D020121:5' Untranslated Regions; D012367:RNA, Viral