title: DNA computation: a photochemically controlled AND gate.
abstract: DNA computation is an emerging field that enables the assembly of complex circuits based on defined DNA logic gates. DNA-based logic gates have previously been operated through purely chemical means, controlling logic operations through DNA strands or other biomolecules. Although gates can operate through this manner, it limits temporal and spatial control of DNA-based logic operations. A photochemically controlled AND gate was developed through the incorporation of caged thymidine nucleotides into a DNA-based logic gate. By using light as the logic inputs, both spatial control and temporal control were achieved. In addition, design rules for light-regulated DNA logic gates were derived. A step-response, which can be found in a controller, was demonstrated. Photochemical inputs close the gap between DNA computation and silicon-based electrical circuitry, since light waves can be directly converted into electrical output signals and vice versa. This connection is important for the further development of an interface between DNA logic gates and electronic devices, enabling the connection of biological systems with electrical circuits.
authors.affiliation: Department of Chemistry, North Carolina State University, Raleigh, North Carolina 27695-8204, USA.
authors.forename: Alex
authors.initials: A
authors.lastname: Prokup
authors.forename: James
authors.initials: J
authors.lastname: Hemphill
authors.forename: Alexander
authors.initials: A
authors.lastname: Deiters
mesh_terms: D001483:Base Sequence; D039301:Computers, Molecular; D004247:DNA / Q000737:chemistry*; D008128:Logic; D010777:Photochemistry
chemical_list: D004247:DNA