title: Detection of prostate cancer on histopathology using color fractals and Probabilistic Pairwise Markov models.
abstract: In this paper we present a system for detecting regions of carcinoma of the prostate (CaP) in H&E stained radical prostatectomy specimens using the color fractal dimension. Color textural information is known to be a valuable characteristic to distinguish CaP from benign tissue. In addition to color information, we know that cancer tends to form contiguous regions. Our system leverages the color staining information of histology as well as spatial dependencies. The color and textural information is first captured using color fractal dimension. To incorporate spatial dependencies, we combine the probability map constructed via color fractal dimension with a novel Markov prior called the Probabilistic Pairwise Markov Model (PPMM). To demonstrate the capability of this CaP detection system, we applied the algorithm to 27 radical prostatectomy specimens from 10 patients. A per pixel evaluation was conducted with ground truth provided by an expert pathologist using only the color fractal feature first, yielding an area under the receiver operator characteristic curve (AUC) curve of 0.790. In conjunction with a Markov prior, the resultant color fractal dimension + Markov random field (MRF) classifier yielded an AUC of 0.831.
authors.affiliation: Department of Biomedical Engineering, Rutgers University, USA.
authors.forename: Elaine
authors.initials: E
authors.lastname: Yu
authors.forename: James P
authors.initials: JP
authors.lastname: Monaco
authors.forename: John
authors.initials: J
authors.lastname: Tomaszewski
authors.forename: Natalie
authors.initials: N
authors.lastname: Shih
authors.forename: Michael
authors.initials: M
authors.lastname: Feldman
authors.forename: Anant
authors.initials: A
authors.lastname: Madabhushi
mesh_terms: D001499:Bayes Theorem; D003116:Color; D017709:Fractals; D006801:Humans; D008297:Male; D008390:Markov Chains; D011336:Probability; D011471:Prostatic Neoplasms / Q000175:diagnosis* / Q000473:pathology; D012372:ROC Curve