title: Tumor malignancy is engaged to prokaryotic homolog toolbox.
abstract: Cancer cells display high proliferation rates and survival provided by high glycolysis, chemoresistance and radioresistance, metabolic features that appear to be activated with malignancy, and seemed to have arisen as early in evolution as in unicellular/prokaryotic organisms. Based on these assumptions, we hypothesize that aggressive phenotypes found in malignant cells may be related to acquired unicellular behavior, launched within a tumor when viral and prokaryotic homologs are overexpressed performing likely robust functions. The ensemble of these expressed viral and prokaryotic close homologs in the proteome of a tumor tissue gives them advantage over normal cells. To assess the hypothesis validity, sequences of human proteins involved in apoptosis, energetic metabolism, cell mobility and adhesion, chemo- and radio-resistance were aligned to homologs present in other life forms, excluding all eukaryotes, using PSI-BLAST, with further corroboration from data available in the literature. The analysis revealed that selected sequences of proteins involved in apoptosis and tumor suppression (as p53 and pRB) scored non-significant (E-value>0.001) with prokaryotic homologs; on the other hand, human proteins involved in cellular chemo- and radio-resistance scored highly significant with prokaryotic and viral homologs (as catalase, E-value=zero). We inferred that such upregulated and/or functionally activated proteins in aggressive malignant cells represent a toolbox of modern human homologs evolved from a similar key set that have granted survival of ancient prokaryotes against extremely harsh environments. According to what has been discussed along this analysis, high mutation rates usually hit hotspots in important conserved protein domains, allowing uncontrolled expansion of more resistant, death-evading malignant clones. That is the case of point mutations in key viral proteins affording viruses escape to chemotherapy, and human homologs of such retroviral proteins (as Ras, Akt and EGFR) can elicit the same phenotype. Furthermore, a corollary to this hypothesis presumes that target-directed anti-cancer therapy should target human protein domains of low similarity to prokaryotic homologs for a well-succeeded anti-cancer therapy.
authors.affiliation: Instituto de Biofísica Carlos Chagas Filho, Pólo Xerém, Universidade Federal do Rio de Janeiro, Brazil. janainaf@biof.ufrj.br
authors.forename: Janaina
authors.initials: J
authors.lastname: Fernandes
authors.forename: Patrícia G
authors.initials: PG
authors.lastname: Guedes
authors.forename: Celso Luiz S
authors.initials: CL
authors.lastname: Lage
authors.forename: Juliany Cola F
authors.initials: JC
authors.lastname: Rodrigues
authors.forename: Claudia de Alencar S
authors.initials: Cde A
authors.lastname: Lage
mesh_terms: D017209:Apoptosis / Q000235:genetics; D002448:Cell Adhesion / Q000235:genetics; D002465:Cell Movement / Q000235:genetics; D002471:Cell Transformation, Neoplastic / Q000235:genetics* / Q000378:metabolism*; D019295:Computational Biology; D004734:Energy Metabolism / Q000235:genetics; D015972:Gene Expression Regulation, Neoplastic / Q000235:genetics*; D005798:Genes, Bacterial / Q000235:genetics*; D052138:Genes, Neoplasm / Q000235:genetics*; D006801:Humans; D008954:Models, Biological; D010641:Phenotype; D011387:Prokaryotic Cells / Q000737:chemistry* / Q000378:metabolism; D016415:Sequence Alignment; D017385:Sequence Homology