title: Next-generation sequencing applications for wheat crop improvement.
abstract: Bread wheat (Triticum aestivum; Poaceae) is a crop plant of great importance. It provides nearly 20% of the world's daily food supply measured by calorie intake, similar to that provided by rice. The yield of wheat has doubled over the last 40 years due to a combination of advanced agronomic practice and improved germplasm through selective breeding. More recently, yield growth has been less dramatic, and a significant improvement in wheat production will be required if demand from the growing human population is to be met. Next-generation sequencing (NGS) technologies are revolutionizing biology and can be applied to address critical issues in plant biology. Technologies can produce draft sequences of genomes with a significant reduction to the cost and timeframe of traditional technologies. In addition, NGS technologies can be used to assess gene structure and expression, and importantly, to identify heritable genome variation underlying important agronomic traits. This review provides an overview of the wheat genome and NGS technologies, details some of the problems in applying NGS technology to wheat, and describes how NGS technologies are starting to impact wheat crop improvement.
authors.affiliation: University of Queensland, School of Agriculture and Food Sciences and Australian Centre for Plant Functional Genomics, Brisbane, QLD 4072, Australia.
authors.forename: Paul J
authors.initials: PJ
authors.lastname: Berkman
authors.forename: Kaitao
authors.initials: K
authors.lastname: Lai
authors.forename: Michal T
authors.initials: MT
authors.lastname: Lorenc
authors.forename: David
authors.initials: D
authors.lastname: Edwards
mesh_terms: D001483:Base Sequence; D018556:Crops, Agricultural / Q000235:genetics*; D018744:DNA, Plant / Q000235:genetics; D020869:Gene Expression Profiling; D005819:Genetic Markers; D018745:Genome, Plant; D023281:Genomics / Q000379:methods; D020641:Polymorphism, Single Nucleotide; D019655:Quantitative Trait, Heritable; D017422:Sequence Analysis, DNA / Q000379:methods; D014908:Triticum / Q000235:genetics*
chemical_list: D018744:DNA, Plant; D005819:Genetic Markers