title: QSTR with extended topochemical atom (ETA) indices. 15. Development of predictive models for toxicity of organic chemicals against fathead minnow using second-generation ETA indices.
abstract: Modern industrialisation has led to the production of millions of toxic chemicals having hazardous effects on the ecosystem. It is impracticable to determine the toxic potential of a large number of chemicals in animal models, making the use of quantitative structure-toxicity relationship (QSTR) models an alternative strategy for toxicity prediction. Recently we introduced a set of second-generation extended topochemical atom (ETA) indices for predictive modelling. Here we have developed predictive toxicity models on a large dataset of 459 diverse chemicals against fathead minnow (Pimephales promelas) using the second-generation ETA indices. These descriptors can be easily calculated from two-dimensional molecular representation without the need of time-consuming conformational analysis and alignment, making the developed models easily reproducible. Considering the importance of hydrophobicity for toxicity prediction, AlogP98 was used as an additional predictor in all the models, which were validated rigorously using multiple strategies. The ETA models were comparable in predictability to those involving various non-ETA topological parameters and those previously reported using various descriptors including computationally demanding quantum-chemical ones.
authors.affiliation: Drug Theoretics and Cheminformatics Laboratory, Division of Medicinal and Pharmaceutical Chemistry, Department of Pharmaceutical Technology , Jadavpur University, Kolkata, India. kunalroy_in@yahoo.com
authors.forename: K
authors.initials: K
authors.lastname: Roy
authors.forename: R Narayan
authors.initials: RN
authors.lastname: Das
mesh_terms: D000818:Animals; D003530:Cyprinidae; D017753:Ecosystem; D004785:Environmental Pollutants / Q000737:chemistry / Q000633:toxicity*; D005062:European Union; D006860:Hydrogen Bonding; D057927:Hydrophobic and Hydrophilic Interactions; D016014:Linear Models; D008956:Models, Chemical; D021281:Quantitative Structure-Activity Relationship
chemical_list: D004785:Environmental Pollutants