title: 'Intelligent' ribozyme whose activity is altered in response to K+ as a result of quadruplex formation.
abstract: The structure of r(GGAGGAGGAGGA) (R12) changes from a single-stranded form to a compact quadruplex one in response to K(+). In a hammerhead ribozyme, two portions of the catalytic core are linked with the stem and are located in close proximity in order to exert activity. In this study, the stem was replaced by R12 (or R11, which lacks the terminal A residue) with or without linker residues. One of the newly constructed ribozymes exhibited enhanced activity in response to K(+), and we suggest that quadruplex formation restored the active catalytic core. Other ribozymes exhibited repressed activity in response to K(+), suggesting that formation of the active core was prevented. Thus, we have succeeded in developing 'intelligent' ribozymes whose activity is either repressed or enhanced in response to K(+). This switching capability may have therapeutic applications because of the differences between intra- and extracellular K(+) concentrations.
authors.affiliation: Institute of Advanced Energy, Kyoto University, Gokasho, Uji, Japan.
authors.forename: Takashi
authors.initials: T
authors.lastname: Nagata
authors.forename: Yu
authors.initials: Y
authors.lastname: Sakurai
authors.forename: Yukari
authors.initials: Y
authors.lastname: Hara
authors.forename: Tsukasa
authors.initials: T
authors.lastname: Mashima
authors.forename: Tsutomu
authors.initials: T
authors.lastname: Kodaki
authors.forename: Masato
authors.initials: M
authors.lastname: Katahira
mesh_terms: D001483:Base Sequence; D020134:Catalytic Domain; D007700:Kinetics; D008958:Models, Molecular; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation / Q000187:drug effects*; D011188:Potassium / Q000494:pharmacology*; D016337:RNA, Catalytic / Q000737:chemistry* / Q000378:metabolism*
chemical_list: D016337:RNA, Catalytic; C427204:hammerhead ribozyme; D011188:Potassium