title: Chromosome segregation in Archaea mediated by a hybrid DNA partition machine.
abstract: Eukarya and, more recently, some bacteria have been shown to rely on a cytoskeleton-based apparatus to drive chromosome segregation. In contrast, the factors and mechanisms underpinning this fundamental process are underexplored in archaea, the third domain of life. Here we establish that the archaeon Sulfolobus solfataricus harbors a hybrid segrosome consisting of two interacting proteins, SegA and SegB, that play a key role in genome segregation in this organism. SegA is an ortholog of bacterial, Walker-type ParA proteins, whereas SegB is an archaea-specific factor lacking sequence identity to either eukaryotic or bacterial proteins, but sharing homology with a cluster of uncharacterized factors conserved in both crenarchaea and euryarchaea, the two major archaeal sub-phyla. We show that SegA is an ATPase that polymerizes in vitro and that SegB is a site-specific DNA-binding protein contacting palindromic sequences located upstream of the segAB cassette. SegB interacts with SegA in the presence of nucleotides and dramatically affects its polymerization dynamics. Our data demonstrate that SegB strongly stimulates SegA polymerization, possibly by promoting SegA nucleation and accelerating polymer growth. Increased expression levels of segAB resulted in severe growth and chromosome segregation defects, including formation of anucleate cells, compact nucleoids confined to one half of the cell compartment and fragmented nucleoids. The overall picture emerging from our findings indicates that the SegAB complex fulfills a crucial function in chromosome segregation and is the prototype of a DNA partition machine widespread across archaea.
authors.affiliation: Department of Biology, University of York, Wentworth Way, York YO10 5DD, United Kingdom.
authors.forename: Anne K
authors.initials: AK
authors.lastname: Kalliomaa-Sanford
authors.forename: Fernando A
authors.initials: FA
authors.lastname: Rodriguez-Castañeda
authors.forename: Brett N
authors.initials: BN
authors.lastname: McLeod
authors.forename: Victor
authors.initials: V
authors.lastname: Latorre-Roselló
authors.forename: Jasmine H
authors.initials: JH
authors.lastname: Smith
authors.forename: Julia
authors.initials: J
authors.lastname: Reimann
authors.forename: Sonja V
authors.initials: SV
authors.lastname: Albers
authors.forename: Daniela
authors.initials: D
authors.lastname: Barillà
mesh_terms: D000251:Adenosine Triphosphatases / Q000737:chemistry / Q000235:genetics / Q000502:physiology*; D020816:Amino Acid Motifs; D001105:Archaea / Q000235:genetics*; D019843:Archaeal Proteins / Q000235:genetics / Q000502:physiology*; D001665:Binding Sites; D019921:Biotinylation; D002875:Chromosomes / Q000648:ultrastructure*; D016000:Cluster Analysis; D017124:Conserved Sequence; D004247:DNA / Q000235:genetics*; D004268:DNA-Binding Proteins / Q000737:chemistry / Q000235:genetics / Q000502:physiology*; D019281:Dimerization; D005786:Gene Expression Regulation; D019766:Genes, Archaeal; D020745:Genome, Archaeal; D017433:Protein Structure, Secondary; D048229:Sulfolobus solfataricus / Q000235:genetics*
chemical_list: D019843:Archaeal Proteins; D004268:DNA-Binding Proteins; D004247:DNA; D000251:Adenosine Triphosphatases