title: Visualizing next-generation sequencing data with JBrowse.
abstract: JBrowse is a web-based genome browser, allowing many sources of data to be visualized, interpreted and navigated in a coherent visual framework. JBrowse uses efficient data structures, pre-generation of image tiles and client-side rendering to provide a fast, interactive browsing experience. Many of JBrowse's design features make it well suited for visualizing high-volume data, such as aligned next-generation sequencing reads.
authors.affiliation: Department of Bioengineering, University of California, Berkeley, CA, USA.
authors.forename: Oscar
authors.initials: O
authors.lastname: Westesson
authors.forename: Mitchell
authors.initials: M
authors.lastname: Skinner
authors.forename: Ian
authors.initials: I
authors.lastname: Holmes
mesh_terms: D019295:Computational Biology; D003626:Data Display; D030541:Databases, Genetic / Q000706:statistics & numerical data*; D023281:Genomics / Q000706:statistics & numerical data; D059014:High-Throughput Nucleotide Sequencing / Q000706:statistics & numerical data; D006801:Humans; D016247:Information Storage and Retrieval; D020407:Internet; D012984:Software; D014584:User-Computer Interface