title: Poincaré recurrences of DNA sequences.
abstract: We analyze the statistical properties of Poincaré recurrences of Homo sapiens, mammalian, and other DNA sequences taken from the Ensembl Genome data base with up to 15 billion base pairs. We show that the probability of Poincaré recurrences decays in an algebraic way with the Poincaré exponent β≈4 even if the oscillatory dependence is well pronounced. The correlations between recurrences decay with an exponent ν≈0.6 that leads to an anomalous superdiffusive walk. However, for Homo sapiens sequences, with the largest available statistics, the diffusion coefficient converges to a finite value on distances larger than one million base pairs. We argue that the approach based on Poncaré recurrences determines new proximity features between different species and sheds a new light on their evolution history.
authors.affiliation: Laboratoire de Physique Théorique du CNRS, IRSAMC, Université de Toulouse, UPS, F-31062 Toulouse, France.
authors.forename: K M
authors.initials: KM
authors.lastname: Frahm
authors.forename: D L
authors.initials: DL
authors.lastname: Shepelyansky
mesh_terms: D000818:Animals; D001483:Base Sequence; D004247:DNA / Q000235:genetics*; D016208:Databases, Factual; D006801:Humans; D008962:Models, Theoretical
chemical_list: D004247:DNA