title: End-to-end distance distribution in fluorescent derivatives of bradykinin in interaction with lipid vesicles.
abstract: Cellular membranes have relevant roles in processes related to proteases like human kallikreins and cathepsins. As enzyme and substrate may interact with cell membranes and associated co-factors, it is important to take into account the behavior of peptide substrates in the lipid environment. In this paper we report an study based on energy transfer in two bradykinin derived peptides labeled with the donor-acceptor pair Abz/Eddnp (ortho-aminobenzoic acid/N-[2,4-dinitrophenyl]-ethylenediamine). Time-resolved fluorescence experiments were performed in phosphate buffer and in the presence of large unilamelar vesicles of phospholipids, and of micelles of sodium dodecyl sulphate (SDS). The decay kinetics were analyzed using the program CONTIN to obtain end-to-end distance distribution functions f(r). Despite of the large difference in the number of residues the end-to-end distance of the longer peptide (9 amino acid residues) is only 20 % larger than the values obtained for the shorter peptide (5 amino acid residues). The proline residue, in position 4 of the bradykinin sequence promotes a turn in the longer peptide chain, shortening its end-to-end distance. The surfactant SDS has a strong disorganizing effect, substantially broadening the distance distributions, while temperature increase has mild effects in the flexibility of the chains, causing small increase in the distribution width. The interaction with phospholipid vesicles stabilizes more compact conformations, decreasing end-to-end distances in the peptides. Anisotropy experiments showed that rotational diffusion was not severely affected by the interaction with the vesicles, suggesting a location for the peptides in the surface region of the bilayer, a result consistent with small effect of lipid phase transition on the peptides conformations.
authors.affiliation: Departamento de Física, Faculdade de Filosofia Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, São Paulo, Brazil.
authors.forename: L R
authors.initials: LR
authors.lastname: Montaldi
authors.forename: M
authors.initials: M
authors.lastname: Berardi
authors.forename: E S
authors.initials: ES
authors.lastname: Souza
authors.forename: L
authors.initials: L
authors.lastname: Juliano
authors.forename: A S
authors.initials: AS
authors.lastname: Ito
mesh_terms: D000595:Amino Acid Sequence; D001920:Bradykinin / Q000737:chemistry*; D004134:Dimyristoylphosphatidylcholine / Q000378:metabolism; D005456:Fluorescent Dyes / Q000737:chemistry* / Q000378:metabolism*; D007700:Kinetics; D008823:Micelles; D009842:Oligopeptides / Q000737:chemistry* / Q000378:metabolism*; D010715:Phosphatidylglycerols / Q000378:metabolism; D010743:Phospholipids / Q000378:metabolism*; D011485:Protein Binding; D013050:Spectrometry, Fluorescence; D053835:Unilamellar Liposomes / Q000378:metabolism*; D014867:Water / Q000737:chemistry
chemical_list: D005456:Fluorescent Dyes; D008823:Micelles; D009842:Oligopeptides; D010715:Phosphatidylglycerols; D010743:Phospholipids; D053835:Unilamellar Liposomes; D014867:Water; C002773:dimyristoylphosphatidylglycerol; D001920:Bradykinin; D004134:Dimyristoylphosphatidylcholine