title: Insights into the 1.59-Mbp largest plasmid of Azospirillum brasilense CBG497.
abstract: The plant growth-promoting proteobacterium Azospirillum brasilense enhances growth of many economically important crops, such as wheat, maize, and rice. The sequencing and annotation of the 1.59-Mbp replicon of A. brasilense CBG497, a strain isolated from a maize rhizosphere grown on an alkaline soil in the northeast of Mexico, revealed a GC content of 68.7 % and the presence of 1,430 potential protein-encoding genes, 1,147 of them classified into clusters of orthologous groups categories, and 16 tRNA genes representing 11 tRNA species. The presence of sixty-two genes representatives of the minimal gene set and chromid core genes suggests its importance in bacterial survival. The phaAB → G operon, reported as involved in the bacterial adaptation to alkaline pH in the presence of K(+), was also found on this replicon and detected in several Azospirillum strains. Phylogenetic analysis suggests that it was laterally acquired. We were not able to show its inference on the adaptation to basic pH, giving a hint about the presence of an alternative system for adaptation to alkaline pH.
authors.affiliation: Laboratorio de Microbiología Agrícola, Escuela Nacional de Ciencias Biológicas, IPN, México DF, Mexico.
authors.forename: Erika
authors.initials: E
authors.lastname: Acosta-Cruz
authors.forename: Florence
authors.initials: F
authors.lastname: Wisniewski-Dyé
authors.forename: Zoé
authors.initials: Z
authors.lastname: Rouy
authors.forename: Valérie
authors.initials: V
authors.lastname: Barbe
authors.forename: María
authors.initials: M
authors.lastname: Valdés
authors.forename: Patrick
authors.initials: P
authors.lastname: Mavingui
mesh_terms: D000595:Amino Acid Sequence; D016949:Azospirillum / Q000235:genetics; D015806:Azospirillum brasilense / Q000145:classification / Q000235:genetics* / Q000254:growth & development; D001483:Base Sequence; D022761:Gene Transfer, Horizontal; D006863:Hydrogen-Ion Concentration; D008800:Mexico; D008969:Molecular Sequence Data; D010802:Phylogeny; D010957:Plasmids / Q000235:genetics*; D017421:Sequence Analysis