title: Bioinformatics evidence for the transfer of mycosporine-like amino acid core (4-deoxygadusol) synthesizing gene from cyanobacteria to dinoflagellates and an attempt to mutate the same gene (YP_324358) in Anabaena variabilis PCC 7937.
abstract: We have identified a homologue of 4-deoxygadusol (core of mycosporine-like amino acids) synthesizing gene (ZP_05036788) from Synechococcus sp. PCC 7335 that was found to have additional functionally unknown N-terminal domain similar to homologues from dinoflagellates based on the ClustalW analysis. Phylogenetic analysis revealed that Synechococcus sp. (ZP_05036788) makes a clade together with dinoflagellates and was closest to the Oxyrrhis marina. This study shows for the first time that N-terminal additional sequences that possess upstream plastid targeting sequence in Heterocapsa triquetra and Karlodinium micrum were already evolved in cyanobacteria, and plastid targeting sequence were evolved later in dinoflagellates after divergence from chloroplast lacking Oxyrrhis marina. Thus, MAAs synthesizing genes were transferred from cyanobacteria to dinoflagellates and possibly Synechococcus sp. PCC 7335 acted as a donor during lateral gene transfer event. In addition, we also tried to mutate 4-deoxygadusol synthesizing gene (YP_324358) of Anabaena variabilis PCC 7937 by homologous recombination, however, all approaches to get complete segregation of the mutants from the wild-type were unsuccessful, showing the essentiality of YP_324358 for A. variabilis PCC 7937.
authors.affiliation: Department of Biology, Friedrich-Alexander University Erlangen-Nuremberg, Staudtstrasse 5, D-91058 Erlangen, Germany.
authors.forename: Shailendra P
authors.initials: SP
authors.lastname: Singh
authors.forename: Donat-P
authors.initials: DP
authors.lastname: Häder
authors.forename: Rajeshwar P
authors.initials: RP
authors.lastname: Sinha
mesh_terms: D000595:Amino Acid Sequence; D000596:Amino Acids / Q000096:biosynthesis / Q000235:genetics*; D046870:Anabaena variabilis / Q000145:classification / Q000235:genetics*; D016000:Cluster Analysis; D019295:Computational Biology; D003227:Conjugation, Genetic; D003511:Cyclohexanols / Q000378:metabolism; D004269:DNA, Bacterial / Q000235:genetics; D004141:Dinoflagellida / Q000145:classification / Q000235:genetics*; D022761:Gene Transfer, Horizontal; D005798:Genes, Bacterial / Q000235:genetics*; D005822:Genetic Vectors; D059765:Homologous Recombination; D008969:Molecular Sequence Data; D009154:Mutation; D019761:Phosphorus-Oxygen Lyases / Q000096:biosynthesis / Q000235:genetics; D010802:Phylogeny; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D017386:Sequence Homology, Amino Acid; D046940:Synechococcus / Q000145:classification / Q000235:genetics*
chemical_list: D000596:Amino Acids; D003511:Cyclohexanols; D004269:DNA, Bacterial; C020001:3-dehydroquinate synthetase; D019761:Phosphorus-Oxygen Lyases