title: Structural dynamics of proximal heme pocket in HemAT-Bs associated with oxygen dissociation.
abstract: HemAT from Bacillus subtilis (HemAT-Bs) is a heme-containing O(2) sensor protein that acts as a chemotactic signal transducer. Binding of O(2) to the heme in the sensor domain of HemAT-Bs induces a conformational change in the protein matrix, and this is transmitted to a signaling domain. To characterize the specific mechanism of O(2)-dependent conformational changes in HemAT-Bs, we investigated time-resolved resonance Raman spectra of the truncated sensor domain and the full-length HemAT-Bs upon O(2) and CO dissociation. A comparison between the O(2) and CO complexes provides insights on O(2)/CO discrimination in HemAT-Bs. While no spectral changes upon CO dissociation were observed in our experimental time window between 10ns and 100μs, the band position of the stretching mode between the heme iron and the proximal histidine, ν(Fe-His), for the O(2)-dissociated HemAT-Bs was lower than that for the deoxy form on time-resolved resonance Raman spectra. This spectral change specific to O(2) dissociation would be associated with the O(2)/CO discrimination in HemAT-Bs. We also compared the results obtained for the truncated sensor domain and the full-length HemAT-Bs, which showed that the structural dynamics related to O(2) dissociation for the full-length HemAT-Bs are faster than those for the sensor domain HemAT-Bs. This indicates that the heme proximal structural dynamics upon O(2) dissociation are coupled with signal transduction in HemAT-Bs.
authors.affiliation: Department of Chemistry, Osaka University, Toyonaka, Osaka, Japan.
authors.forename: Yuu
authors.initials: Y
authors.lastname: Yoshida
authors.forename: Haruto
authors.initials: H
authors.lastname: Ishikawa
authors.forename: Shigetoshi
authors.initials: S
authors.lastname: Aono
authors.forename: Yasuhisa
authors.initials: Y
authors.lastname: Mizutani
mesh_terms: D001412:Bacillus subtilis / Q000737:chemistry / Q000378:metabolism*; D001426:Bacterial Proteins / Q000737:chemistry* / Q000235:genetics; D002248:Carbon Monoxide / Q000737:chemistry; D004926:Escherichia coli / Q000235:genetics; D015870:Gene Expression; D006418:Heme / Q000737:chemistry*; D000081062:Heme-Binding Proteins; D006420:Hemeproteins / Q000737:chemistry* / Q000235:genetics; D006639:Histidine / Q000737:chemistry*; D007501:Iron / Q000737:chemistry; D007700:Kinetics; D010100:Oxygen / Q000737:chemistry*; D017434:Protein Structure, Tertiary; D011993:Recombinant Fusion Proteins / Q000737:chemistry / Q000235:genetics; D015398:Signal Transduction; D013059:Spectrum Analysis, Raman
chemical_list: D001426:Bacterial Proteins; D000081062:Heme-Binding Proteins; D006420:Hemeproteins; D011993:Recombinant Fusion Proteins; C404449:heme protein, bacteria; D006418:Heme; D006639:Histidine; D002248:Carbon Monoxide; D007501:Iron; D010100:Oxygen