title: Structural analysis of mycolic acids from phenol-degrading strain of Rhodococcus erythropolis by liquid chromatography-tandem mass spectrometry.
abstract: We used reversed phase liquid chromatography-electrospray ionization tandem mass spectrometry for direct analysis of mycolic acids (MAs) from four different cultivations of Rhodococcus erythropolis. This technique enabled us to identify and quantify the specific molecular species of MAs directly from lipid extracts of the bacterium, including the determination of their basic characteristics such as retention time and mass spectra. We identified a total of 60 molecular species of MAs by means of LC/MS. In collision-induced dissociation tandem mass spectrometry, the [M-H](-) ions eliminated two residues, i.e., meroaldehyde and carboxylate anions containing α-alkyl chains. The structural information from these fragment ions affords structural assignment of the mycolic acids, including the lengths and number of double bond(s). Two strains, i.e., R. erythropolis CCM 2595 and genetically modified strain CCM 2595 pSRK 21 phe were cultivated on two different substrates (phenol and phenol with addition of humic acids as a sole carbon source). The addition of humic acids showed that there is a marked increase of unsaturated mycolic acids, mostly in the range of 20-100 %. This effect is more pronounced in the R. erythropolis CCM 2595 strain.
authors.affiliation: Department of Biotechnology, Institute of Chemical Technology Prague, Technická 5, Prague, Czech Republic.
authors.forename: Irena
authors.initials: I
authors.lastname: Kolouchová
authors.forename: Olga
authors.initials: O
authors.lastname: Schreiberová
authors.forename: Jan
authors.initials: J
authors.lastname: Masák
authors.forename: Karel
authors.initials: K
authors.lastname: Sigler
authors.forename: Tomáš
authors.initials: T
authors.lastname: Rezanka
mesh_terms: D001711:Biotransformation; D002244:Carbon / Q000378:metabolism; D002853:Chromatography, Liquid; D003470:Culture Media / Q000737:chemistry; D006812:Humic Substances; D009171:Mycolic Acids / Q000737:chemistry* / Q000378:metabolism*; D019800:Phenol / Q000378:metabolism*; D012240:Rhodococcus / Q000737:chemistry* / Q000378:metabolism*; D053719:Tandem Mass Spectrometry
chemical_list: D003470:Culture Media; D006812:Humic Substances; D009171:Mycolic Acids; D019800:Phenol; D002244:Carbon