title: Identification of crotonyl glycine in urine of sheep after 48 h road transport.
abstract: Thousands of metabolites are excreted in urine, and potentially can be detected in NMR spectra. Currently, NMR spectral information for about one thousand metabolites has been deposited in publicly available sources, limiting the identification of chemical compounds that are potential biomarkers for clinical and subclinical applications. This study reports the identification of crotonyl glycine, one of the key metabolites detected by ¹H NMR as excreted in the urine of sheep after 48 h road transport and during the subsequent 72 h recovery period. This metabolite was important in separating the metabolic responses as expressed in the urine from animals undergoing shorter road transport treatments. At the time of the metabonomic analysis, the NMR signals from this metabolite were designated as unassigned as no match was found in public databases or the literature. Selected sheep urine samples containing the metabolite were resolved by reversed phase HPLC reducing the sample complexity. Subsequent ¹H NMR spectra of the collected fractions revealed that the unknown metabolite was present in a single HPLC fraction. High-resolution 1D and 2D ¹H NMR spectra of this fraction followed by mass determination of the parent ion and its fragments by nanoESI-TOF-MS/MS revealed the identity of the compound as crotonyl glycine (N-but-(E)-2-enoyl glycine). The HPLC fraction was subsequently spiked with synthetic crotonyl glycine which confirmed identification.
authors.affiliation: CSIRO Livestock Industries, Queensland Bioscience Precinct, 306 Carmody Rd., St Lucia, Qld 4067, Australia. daisy.li@csiro.au
authors.forename: Juan
authors.initials: J
authors.lastname: Li
authors.forename: Horst Joachim
authors.initials: HJ
authors.lastname: Schirra
authors.forename: Yihua
authors.initials: Y
authors.lastname: Yu
authors.forename: Michelle L
authors.initials: ML
authors.lastname: Colgrave
authors.forename: Martin J
authors.initials: MJ
authors.lastname: Stoermer
authors.forename: Gene
authors.initials: G
authors.lastname: Wijffels
mesh_terms: D000818:Animals; D002851:Chromatography, High Pressure Liquid; D005998:Glycine / Q000652:urine*; D009682:Magnetic Resonance Spectroscopy; D012756:Sheep; D014186:Transportation
chemical_list: D005998:Glycine