Proteomic analysis of endogenous nitrotryptophan-containing proteins in rat hippocampus and cerebellum.
Nitration of tryptophan residues is a novel post-translational modification. In the present study, we examined whether NO2Trp (nitrotryptophan)-containing proteins are produced in the hippocampus and cerebellum of the adult rat under physiological conditions in vivo. Using Western blot analysis with anti-6-NO2Trp-specific antibody, we found many similar immunoreactive spots in the protein extracts from both regions. These spots were subsequently subjected to trypsin digestion and LC-ESI-MS/MS (LC-electrospray ionization-tandem MS) analysis. We identified several cytoskeletal proteins and glycolytic enzymes as NO2Trp-containing proteins and determined the position of nitrated tryptophan residues with significant ion score levels (P<0.05) in several proteins in both regions. We also observed that the total amount of NO2Trp-containing proteins in the cerebellum was significantly greater than that in the hippocampus (P<0.05). Moreover, IP (immunoprecipitation) assays using anti-aldolase C antibody showed that the relative intensity of immunostaining for NO2Trp over aldolase C was much higher in cerebellum than in hippocampus. The amounts of nNOS (neuronal nitric oxide synthase) and eNOS (endothelial nitric oxide synthase) were much greater in cerebellum than in hippocampus. This is the first evidence of several specific sites of nitrated tryptophan in proteins under physiological conditions in vivo.
Sportology Center, Juntendo University Graduate School of Medicine, Chiba, Japan.
Munehiro
M
Uda
Hiroaki
H
Kawasaki
Ayako
A
Shigenaga
Takeshi
T
Baba
Fumiyuki
F
Yamakura
D000595:Amino Acid Sequence; D000818:Animals; D002531:Cerebellum / Q000737:chemistry* / Q000378:metabolism; D006624:Hippocampus / Q000737:chemistry* / Q000378:metabolism; D008297:Male; D008969:Molecular Sequence Data; D052248:Nitric Oxide Synthase Type I / Q000737:chemistry / Q000378:metabolism; D052250:Nitric Oxide Synthase Type III / Q000737:chemistry / Q000378:metabolism; D011499:Protein Processing, Post-Translational; D011506:Proteins / Q000737:chemistry* / Q000378:metabolism; D040901:Proteomics; D051381:Rats; D011916:Rats, Inbred F344; D053719:Tandem Mass Spectrometry; D014364:Tryptophan / Q000031:analogs & derivatives* / Q000032:analysis / Q000378:metabolism
D011506:Proteins; C055424:6-nitrotryptophan; D014364:Tryptophan; D052248:Nitric Oxide Synthase Type I; D052250:Nitric Oxide Synthase Type III