Chemical inhomogeneity in the ultrafast dynamics of the DXCF cyanobacteriochrome Tlr0924.
Cyanobacteriochromes (CBCRs) are diverse biliprotein photosensors distantly related to the red/far-red photoreceptors of the phytochrome family. There are several subfamilies of CBCRs, displaying varied spectral responses spanning the entire visible region. Tlr0924 belongs to the DXCF subfamily that utilizes the Cys residue in a conserved Asp-Xaa-Cys-Phe (DXCF) motif to form a second covalent linkage to the chromophore, resulting in a blue-absorbing dark state. Photoconversion leads to elimination of this linkage, resulting in a green-absorbing photoproduct. Tlr0924 initially incorporates phycocyanobilin (PCB) as a chromophore, exhibiting a blue/orange photocycle, but slowly isomerizes PCB to phycoviolobilin (PVB) to yield a blue/green photocycle. Ultrafast transient absorption spectroscopy was used to study both forward and reverse reaction photodynamics of the recombinant GAF domain of Tlr0924. Primary photoproducts were identified, as were subsequent intermediates at 1 ms. PCB and PVB population photodynamics were decomposed using global target analysis. PCB and PVB populations exhibit similar and parallel photocycles in Tlr0924, but the PVB population exhibits faster excited-state decay in both reaction directions. On the basis of longer time analysis, we show that the photochemical coordinate (15,16-isomerization) and second-linkage coordinate (elimination or bond formation at C10) are separate processes in both directions.
Department of Chemistry, One Shields Ave, University of California, Davis, Davis, California 95616, United States.
Lucy H
LH
Freer
Peter W
PW
Kim
Scott C
SC
Corley
Nathan C
NC
Rockwell
Lu
L
Zhao
Arthur J
AJ
Thibert
J Clark
JC
Lagarias
Delmar S
DS
Larsen
D020816:Amino Acid Motifs; D000595:Amino Acid Sequence; D007536:Isomerism; D007700:Kinetics; D020283:Photoreceptors, Microbial / Q000737:chemistry* / Q000235:genetics / Q000378:metabolism; D052980:Phycobilins / Q000737:chemistry; D010798:Phycocyanin / Q000737:chemistry; D017434:Protein Structure, Tertiary; D011994:Recombinant Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism
D020283:Photoreceptors, Microbial; D052980:Phycobilins; D011994:Recombinant Proteins; C526232:phycoviolobilin; D010798:Phycocyanin; C011069:phycocyanobilin