Composition and phylogenetic analysis of vitellogenin coding sequences in the Indonesian coelacanth Latimeria menadoensis.
The coelacanth Latimeria menadoensis, a living fossil, occupies a key phylogenetic position to explore the changes that have affected the genomes of the aquatic vertebrates that colonized dry land. This is the first study to isolate and analyze L. menadoensis mRNA. Three different vitellogenin transcripts were identified and their inferred amino acid sequences compared to those of other known vertebrates. The phylogenetic data suggest that the evolutionary history of this gene family in coelacanths was characterized by a different duplication event than those which occurred in teleosts, amniotes, and amphibia. Comparison of the three sequences highlighted differences in functional sites. Moreover, despite the presence of conserved sites compared with the other oviparous vertebrates, some sites were seen to have changed, others to be similar only to those of teleosts, and others still to resemble only to those of tetrapods.
Dipartimento Scienze della Vita e dell'Ambiente, Università Politecnica delle Marche, Ancona, Italy.
Adriana
A
Canapa
Ettore
E
Olmo
Mariko
M
Forconi
Alberto
A
Pallavicini
Monica Daisy
MD
Makapedua
Maria Assunta
MA
Biscotti
Marco
M
Barucca
D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D001499:Bayes Theorem; D019295:Computational Biology; D017931:DNA Primers / Q000235:genetics; D018076:DNA, Complementary / Q000235:genetics; D005399:Fishes / Q000145:classification / Q000235:genetics*; D020131:Genes, Duplicate / Q000235:genetics; D007214:Indonesia; D008099:Liver / Q000378:metabolism; D008297:Male; D008957:Models, Genetic; D008969:Molecular Sequence Data; D010802:Phylogeny; D012313:RNA / Q000235:genetics*; D017422:Sequence Analysis, DNA; D013045:Species Specificity; D013737:Testis / Q000378:metabolism; D014819:Vitellogenins / Q000235:genetics*
D017931:DNA Primers; D018076:DNA, Complementary; D014819:Vitellogenins; D012313:RNA