title: Prioritizing live bird markets at risk of avian influenza H5N1 virus contamination for intervention: a simple tool for low resource settings.
abstract: Live bird markets (LBMs) are at risk of contamination with the avian influenza H5N1 virus. There are a number of methods for prioritizing LBMs for intervention to curb the risk of contamination. Selecting a method depends on diagnostic objective and disease prevalence. In a low resource setting, options for prioritization are constricted by the cost of and resources available for tool development and administration, as well as the resources available for intervention. In this setting, tools can be developed using previously collected data on risk factors for contamination, and translated into prediction equations, including decision trees (DTs). DTs are a graphical type of classifier that combine simple questions about the data in an intuitive way. DTs can be used to develop tools tailored to different diagnostic objectives. To demonstrate the utility of this method, risk factor data arising from a previous cross-sectional study in 83 LBMs in Indonesia were used to construct DTs. A DT with high specificity was selected for the initial stage of an LBM intervention campaign in which authorities aim to focus intervention resources on a small set of LBMs that are at near-certain risk of contamination. Another DT with high sensitivity was selected for later stages in an intervention campaign in which authorities aim to detect and prioritize all LBMs with the risk factors for virus contamination. The best specific DT achieved specificity of 77% and the best sensitive DT achieved sensitivity of 90%. The specific DT had two variables: the size of the duck population in the LBM and the human population density in the LBM's district. The sensitive DT had three variables: LBM location, whether solid waste was removed from the LBM daily and whether the LBM was zoned to separate the bird holding, slaughtering and sale areas. High specificity or sensitivity will be preferred by authorities depending on the stage of the intervention campaign. The study demonstrates that simple tools utilizing DTs can be developed to prioritize LBMs for intervention to control H5N1-virus. DT tools are simple to apply, suitable for low-resource settings and can be tailored to the particular needs and stage of the disease control program.
authors: National Centre for Epidemiology and Population Health, College of Medicine, Biology & Environment, The Australian National University, Canberra, ACT 0200, Australia. ginasamaan@yahoo.com
authors: Gina
authors: G
authors: Samaan
authors: Risa
authors: R
authors: Indriani
authors: Luis Roman
authors: LR
authors: Carrasco
authors: Kamalini
authors: K
authors: Lokuge
authors: Alex R
authors: AR
authors: Cook
authors: Paul M
authors: PM
authors: Kelly
authors: Rma
authors: R
authors: Adjid
mesh_terms: D000818:Animals; D002645:Chickens; D003430:Cross-Sectional Studies; D003663:Decision Trees; D018562:Disease Transmission, Infectious / Q000517:prevention & control / Q000662:veterinary*; D004372:Ducks; D007214:Indonesia; D053124:Influenza A Virus, H5N1 Subtype / Q000302:isolation & purification*; D005585:Influenza in Birds / Q000517:prevention & control / Q000635:transmission / Q000821:virology*; D011201:Poultry Diseases / Q000517:prevention & control / Q000635:transmission / Q000821:virology*; D015995:Prevalence; D012307:Risk Factors