IMG/M-HMP: a metagenome comparative analysis system for the Human Microbiome Project.
The Integrated Microbial Genomes and Metagenomes (IMG/M) resource is a data management system that supports the analysis of sequence data from microbial communities in the integrated context of all publicly available draft and complete genomes from the three domains of life as well as a large number of plasmids and viruses. IMG/M currently contains thousands of genomes and metagenome samples with billions of genes. IMG/M-HMP is an IMG/M data mart serving the US National Institutes of Health (NIH) Human Microbiome Project (HMP), focussed on HMP generated metagenome datasets, and is one of the central resources provided from the HMP Data Analysis and Coordination Center (DACC). IMG/M-HMP is available at http://www.hmpdacc-resources.org/imgm_hmp/.
Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America. vmmarkowitz@lbl.gov
Victor M
VM
Markowitz
I-Min A
IM
Chen
Ken
K
Chu
Ernest
E
Szeto
Krishna
K
Palaniappan
Biju
B
Jacob
Anna
A
Ratner
Konstantinos
K
Liolios
Ioanna
I
Pagani
Marcel
M
Huntemann
Konstantinos
K
Mavromatis
Natalia N
NN
Ivanova
Nikos C
NC
Kyrpides
D001105:Archaea / Q000235:genetics; D001419:Bacteria / Q000235:genetics; D003628:Database Management Systems; D030541:Databases, Genetic; D056890:Eukaryota / Q000235:genetics; D006801:Humans; D020407:Internet; D054892:Metagenome / Q000235:genetics*; D014584:User-Computer Interface