[Differences in spatial structures of the influenza virus M1 protein in crystal, solution and virion].
Spatial structure of the influenza virus A/Puerto Rico/8/34 (PR8, subtype H1N1) M1 protein in a solution and composition of the virion was studied by tritium planigraphy technique. The special algorithm for modeling of the spatial structure is used to simulate the experiment, as well as a set of algorithms predicting secondary structure and disordered regions in proteins. Tertiary structures were refined using the program Rosetta. To compare the structures in solution and in virion, also used the X-ray diffraction data for NM-domain. The main difference between protein structure in solution and crystal is observed in the contact region of N- and M-domains, which are more densely packed in the crystalline state. Locations include the maximum label is almost identical to the unstructured regions of proteins predicted by bioinformatics analysis. These areas are concentrated in the C-domain and in the loop regions between the M-, N-, and C-domains. Analytical centrifugation and dynamic laser light scattering confirm data of tritium planigraphy. Anomalous hydrodynamic size, and low structuring of the M1 protein in solution were found. The multifunctionality of protein in the cell appears to be associated with its plastic tertiary structure, which provides at the expense of unstructured regions of contact with various molecules-partners.
E N
EN
Bogacheva
A A
AA
Dolgov
A L
AL
Chulichkov
A V
AV
Shishkov
A L
AL
Ksenofontov
N V
NV
Fedorova
L A
LA
Baratova
D053118:Influenza A Virus, H1N1 Subtype / Q000737:chemistry*; D008958:Models, Molecular; D017434:Protein Structure, Tertiary; D014763:Viral Matrix Proteins / Q000737:chemistry*; D014771:Virion / Q000737:chemistry*; D014961:X-Ray Diffraction
C488936:M1 protein, Influenza A virus; D014763:Viral Matrix Proteins