Gemma: a resource for the reuse, sharing and meta-analysis of expression profiling data.
Gemma is a database, analysis software system and web site for genomics data re-use and meta-analysis. Currently, Gemma contains analyzed data from over 3300 expression profiling studies, yielding hundreds of millions of differential expression results and coexpression patterns (correlated expression) for retrieval and visualization. With optional registration users can save their own data and securely share it with other users. Web services and integration with third-party resources further increase the scope of the tools, which include a Cytoscape plugin.


BACKGROUND
http://chibi.ubc.ca/Gemma, Apache 2.0 license.
Department of Psychiatry and Centre for High-throughput Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Anton
A
Zoubarev
Kelsey M
KM
Hamer
Kiran D
KD
Keshav
E Luke
EL
McCarthy
Joseph Roy C
JR
Santos
Thea
T
Van Rossum
Cameron
C
McDonald
Adam
A
Hall
Xiang
X
Wan
Raymond
R
Lim
Jesse
J
Gillis
Paul
P
Pavlidis
D003628:Database Management Systems; D030541:Databases, Genetic; D020869:Gene Expression Profiling / Q000379:methods*; D023281:Genomics / Q000379:methods*; D015201:Meta-Analysis as Topic; D012984:Software