Mechanical elasticity as a physical signature of conformational dynamics in a virus particle.
In this study we test the hypothesis that mechanically elastic regions in a virus particle (or large biomolecular complex) must coincide with conformationally dynamic regions, because both properties are intrinsically correlated. Hypothesis-derived predictions were subjected to verification by using 19 variants of the minute virus of mice capsid. The structural modifications in these variants reduced, preserved, or restored the conformational dynamism of regions surrounding capsid pores that are involved in molecular translocation events required for virus infectivity. The mechanical elasticity of the modified capsids was analyzed by atomic force microscopy, and the results corroborated every prediction tested: Any mutation (or chemical cross-linking) that impaired a conformational rearrangement of the pore regions increased their mechanical stiffness. On the contrary, any mutation that preserved the dynamics of the pore regions also preserved their elasticity. Moreover, any pseudo-reversion that restored the dynamics of the pore regions (lost through previous mutation) also restored their elasticity. Finally, no correlation was observed between dynamics of the pore regions and mechanical elasticity of other capsid regions. This study (i) corroborates the hypothesis that local mechanical elasticity and conformational dynamics in a viral particle are intrinsically correlated; (ii) proposes that determination by atomic force microscopy of local mechanical elasticity, combined with mutational analysis, may be used to identify and study conformationally dynamic regions in virus particles and large biomolecular complexes; (iii) supports a connection between mechanical properties and biological function in a virus; (iv) shows that viral capsids can be greatly stiffened by protein engineering for nanotechnological applications.
Centro de Biología Molecular Severo Ochoa (Consejo Superior de Investigaciones Científicas and Universidad Autónoma de Madrid), Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain.
Milagros
M
Castellanos
Rebeca
R
Pérez
Carolina
C
Carrasco
Mercedes
M
Hernando-Pérez
Julio
J
Gómez-Herrero
Pedro J
PJ
de Pablo
Mauricio G
MG
Mateu
D036022:Capsid Proteins / Q000737:chemistry* / Q000648:ultrastructure; D004548:Elasticity; D018625:Microscopy, Atomic Force; D020527:Microscopy, Scanning Probe; D008915:Minute Virus of Mice; D008958:Models, Molecular; D016297:Mutagenesis, Site-Directed; D036103:Nanotechnology / Q000379:methods; D010957:Plasmids / Q000235:genetics; D011487:Protein Conformation; D015202:Protein Engineering / Q000379:methods; D013050:Spectrometry, Fluorescence; D013816:Thermodynamics; D014771:Virion / Q000737:chemistry* / Q000648:ultrastructure
D036022:Capsid Proteins