title: RAZOR EX anthrax air detection system.
abstract: The RAZOR EX Anthrax Air Detection System, developed by Idaho Technology, Inc. (ITI), is a qualitative method for the detection of Bacillus anthracis spores collected by air collection devices. This system comprises a DNA extraction kit, a freeze-dried PCR reagent pouch, and the RAZOR EX real-time PCR instrument. Each pouch contains three assays, which distinguish potentially virulent B. anthracis from avirulent B. anthracis and other Bacillus species. These assays target the pXO1 and pXO2 plasmids and chromosomal DNA. When all targets are detected, the instrument makes an "anthrax detected" call, meaning that virulence genes of the anthrax bacillus are present. This report describes results from AOAC Method Developer (MD) and Independent Laboratory Validation (ILV) studies, which include matrix, inclusivity/exclusivity, environmental interference, upper and lower LOD of DNA, robustness, product consistency and stability, and instrument variation testing. In the MD studies, the system met the acceptance criteria for sensitivity and specificity, and the performance was consistent, stable, and robust for all components of the system. For the matrix study, the acceptance criteria of 95/96 expected calls was met for three of four matrixes, clean dry filters being the exception. Ninety-four of the 96 clean dry filter samples tested gave the expected calls. The nucleic acid limit of detection was 5-fold lower than AOAC's acceptable minimum detection limit. The system demonstrated no tendency for false positives when tested with Bacillus cereus. Environmental substances did not inhibit accurate detection of B. anthracis. The ILV studies yielded similar results for the matrix and inclusivity/exclusivity studies. The ILV environmental interference study included environmental substances and environmental organisms. Subsoil at a high concentration was found to negatively interfere with the pXO1 reaction. No interference was observed from the environmental organisms. The nucleic acid LOD, however, was 10 times higher (1 pg/reaction, equivalent to about 200 spores) than that found in the MD study. These results indicate that the RAZOR System is a sensitive and specific system that accurately identifies B. anthracis in aerosol matrixes and in the presence of interfering substances, and that the method can be performed by an independent laboratory and achieve similar results.
authors: Idaho Technology, Inc., Salt Lake City, UT 84108, USA. usha_spaulding@idahotech.com
authors: Usha K
authors: UK
authors: Spaulding
authors: Clarissa J
authors: CJ
authors: Christensen
authors: Robert J
authors: RJ
authors: Crisp
authors: Michael B
authors: MB
authors: Vaughn
authors: Robert C
authors: RC
authors: Trauscht
authors: Jordan R
authors: JR
authors: Gardner
authors: Stephanie A
authors: SA
authors: Thatcher
authors: Kristine M
authors: KM
authors: Clemens
authors: David H F
authors: DH
authors: Teng
authors: Abigail
authors: A
authors: Bird
authors: Irene M
authors: IM
authors: Ota
authors: Ted
authors: T
authors: Hadfield
authors: Valorie
authors: V
authors: Ryan
authors: Sharon L
authors: SL
authors: Brunelle
mesh_terms: D000391:Air Microbiology; D001408:Bacillus anthracis / Q000235:genetics / Q000302:isolation & purification*; D004269:DNA, Bacterial / Q000032:analysis; D057230:Limit of Detection; D016133:Polymerase Chain Reaction / Q000295:instrumentation / Q000379:methods*; D011933:Reagent Kits, Diagnostic; D013171:Spores, Bacterial / Q000302:isolation & purification
chemical_list: D004269:DNA, Bacterial; D011933:Reagent Kits, Diagnostic