title: Systematic functional characterization of cytochrome P450 2E1 promoter variants in the Chinese Han population.
abstract: CYP2E1 promoter polymorphisms can lead to significant interindividual differences in expression of CYP2E1. Using a database of CYP2E1 gene polymorphisms established in 2010, our study aimed to functionally characterize the single nucleotide polymorphisms (SNPs) of the promoter region and corresponding haplotypes in the Chinese Han population. Six novel SNPs and seven haplotypes with a frequency equal to or greater than 0.01 were constructed on a luciferase reporter system on the basis of site-directed mutagenesis. Dual luciferase reporter systems were used to analyze regulatory activity. The constructs including single novel SNP mutations exhibited insignificant change in luciferase activity, whereas, the activity produced by Haplo1(GTTGCTATAT), Haplo2 (CTTGCTATAT) and Haplo7 (GAGCTCACAT), containing a -333T>A polymorphism was significantly greater than for the wild type in Hep G2 cells (p<0.05), being 1.5-, 2.0- and 1.4- times greater respectively. These findings suggest the possibility of significant clinical prediction of adverse drug reaction and the facilitation of personalized medicine.
authors: Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders (Ministry of Education), Shanghai Jiao Tong University, Shanghai, China.
authors: Xunyi
authors: X
authors: Huang
authors: Lili
authors: L
authors: Chen
authors: Wenlong
authors: W
authors: Song
authors: Ling
authors: L
authors: Chen
authors: Jiamin
authors: J
authors: Niu
authors: Xia
authors: X
authors: Han
authors: Guoyin
authors: G
authors: Feng
authors: Lin
authors: L
authors: He
authors: Shengying
authors: S
authors: Qin
mesh_terms: D044466:Asian People / Q000235:genetics*; D001665:Binding Sites / Q000235:genetics; D002681:China; D019392:Cytochrome P-450 CYP2E1 / Q000235:genetics*; D005006:Ethnicity / Q000235:genetics*; D017930:Genes, Reporter; D005828:Genetics, Population; D006239:Haplotypes / Q000235:genetics; D056945:Hep G2 Cells; D006801:Humans; D008156:Luciferases / Q000378:metabolism; D016297:Mutagenesis, Site-Directed; D020641:Polymorphism, Single Nucleotide / Q000235:genetics*; D011401:Promoter Regions, Genetic; D015183:Restriction Mapping; D012984:Software; D014157:Transcription Factors / Q000378:metabolism
chemical_list: D014157:Transcription Factors; D008156:Luciferases; D019392:Cytochrome P-450 CYP2E1