title: Rapid and sensitive quantification of Vibrio cholerae and Vibrio mimicus cells in water samples by use of catalyzed reporter deposition fluorescence in situ hybridization combined with solid-phase cytometry.
abstract: A new protocol for rapid, specific, and sensitive cell-based quantification of Vibrio cholerae/Vibrio mimicus in water samples was developed. The protocol is based on catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH) in combination with solid-phase cytometry. For pure cultures, we were able to quantify down to 6 V. cholerae cells on one membrane with a relative precision of 39% and down to 12 cells with a relative precision of 17% after hybridization with the horseradish peroxidase (HRP)-labeled probe Vchomim1276 (specific for V. cholerae and V. mimicus) and signal amplification. The corresponding position of the probe on the 16S rRNA is highly accessible even when labeled with HRP. For the first time, we were also able to successfully quantify V. cholerae/V. mimicus via solid-phase cytometry in extremely turbid environmental water samples collected in Austria. Cell numbers ranged from 4.5 × 10(1) cells ml(-1) in the large saline lake Neusiedler See to 5.6 × 10(4) cells ml(-1) in an extremely turbid shallow soda lake situated nearby. We therefore suggest CARD-FISH in combination with solid-phase cytometry as a powerful tool to quantify V. cholerae/V. mimicus in ecological studies as well as for risk assessment and monitoring programs.
authors.affiliation: Medical University Vienna, Institute for Hygiene and Applied Immunology, Water Hygiene, Vienna, Austria.
authors.forename: Sonja
authors.initials: S
authors.lastname: Schauer
authors.forename: Regina
authors.initials: R
authors.lastname: Sommer
authors.forename: Andreas H
authors.initials: AH
authors.lastname: Farnleitner
authors.forename: Alexander K T
authors.initials: AK
authors.lastname: Kirschner
mesh_terms: D001317:Austria; D058491:Bacterial Load / Q000379:methods*; D006735:Horseradish Peroxidase / Q000378:metabolism; D019044:Image Cytometry / Q000379:methods*; D017404:In Situ Hybridization, Fluorescence / Q000379:methods*; D015345:Oligonucleotide Probes / Q000737:chemistry / Q000235:genetics; D012680:Sensitivity and Specificity; D013194:Staining and Labeling; D013997:Time Factors; D014734:Vibrio cholerae / Q000302:isolation & purification*; D044164:Vibrio mimicus / Q000302:isolation & purification*; D014871:Water Microbiology
chemical_list: D015345:Oligonucleotide Probes; D006735:Horseradish Peroxidase