title: [Dynamic changes in functional genes for nitrogen bioremediation of petroleum-contaminated soil cycle during].
abstract: Microorganisms in nitrogen cycle serve as an important part of the ecological function of soil. The aim of this research was to monitor the abundance of nitrogen-fixing, denitrifying and nitrifying bacteria during bioaugmentation of petroleum-contaminated soil using real-time polymerase chain reaction (real-time PCR) of nifH, narG and amoA genes which encode the key enzymes in nitrogen fixation, nitrification and ammoniation respectively. Three different kinds of soils, which are petroleum-contaminated soil, normal soil, and remediated soil, were monitored. It was shown that the amounts of functional microorganisms in petroleum-contaminated soil were far less than those in normal soil, while the amounts in remediated soil and normal soil were comparable. Results of this experiment demonstrate that nitrogen circular functional bacteria are inhibited in petroleum-contaminated soil and can be recovered through bioremediation. Furthermore, copies of the three functional genes as well as total petroleum hydrocarbons (TPH) for soils with six different treatments were monitored. Among all treatments, the one, into which both E. cloacae as an inoculant and wheat straw as an additive were added, obtained the maximum copies of 2.68 x 10(6), 1.71 x 10(6) and 8.54 x 10(4) per gram dry soil for nifH, narG and amoA genes respectively, companying with the highest degradation rate (48% in 40 days) of TPH. The recovery of functional genes and removal of TPH were better in soil inoculated with E cloacae and C echinulata collectively than soil inoculated with E cloacae only. All above results suggest that the nitrogen circular functional genes could be applied to monitor and assess the bioremediation of petroleum-contaminated soil.
authors.affiliation: Department of Chemical Engineering, Tsinghua University, Beijing 100084, China. wubb07@mails.tsinghua.edu.cn
authors.forename: Bin-Bin
authors.initials: BB
authors.lastname: Wu
authors.forename: Dian-Nan
authors.initials: DN
authors.lastname: Lu
authors.forename: Zheng
authors.initials: Z
authors.lastname: Liu
mesh_terms: D001673:Biodegradation, Environmental; D041841:Bradyrhizobiaceae / Q000235:genetics* / Q000378:metabolism; D058440:Denitrification; D017753:Ecosystem; D005798:Genes, Bacterial / Q000235:genetics*; D058465:Nitrification; D009576:Nitrobacter / Q000235:genetics / Q000378:metabolism; D009584:Nitrogen / Q000378:metabolism*; D058458:Nitrogen Cycle; D010578:Petroleum; D012989:Soil Pollutants / Q000302:isolation & purification*
chemical_list: D010578:Petroleum; D012989:Soil Pollutants; D009584:Nitrogen