title: [Stoichiometric model of folate-dependent metabolism of one-carbon units in human placenta].
abstract: The work is dedicated to creation of the mathematical model of folate-dependent one-carbon unit metabolism (FOCM) and study of its function in human placenta under homocysteine load and the most common mutations in the genes of methylenetetrahydrofolate reductase (MTHFR) and cystathionine beta-synthase (CBS). In the model we have taken into account specific features of placental expression of genes that encode enzymes of FOCM. Using software tools Metatool and COBRAToolbox we have identified key metabolites, elementary modes and metabolic fluxes through different reactions of the system. It is shown that the most vulnerable links in the system are the folate cycle and synthesis of precursors of nucleic acids, inosine monophosphate and thymidyne monophosphates, which are changing in the broad range from significant inhibition to activation depending on the imposed conditions. The most stable links in the system are the reactions of glutathione and taurine synthesis. Simulation results coincide with the results obtained in similar experimental conditions. Under certain imposed conditions non-obvious relationships between the system links are revealed, and this becomes the basis for a purposeful test of predictions generated by the model.
authors.forename: R R
authors.initials: RR
authors.lastname: Rodrihes
authors.forename: I S
authors.initials: IS
authors.lastname: Lushchyk
authors.forename: M Iu
authors.initials: MIu
authors.lastname: Obolens'ka
mesh_terms: D002244:Carbon / Q000378:metabolism*; D003198:Computer Simulation; D003541:Cystathionine beta-Synthase / Q000235:genetics / Q000378:metabolism; D005260:Female; D005492:Folic Acid / Q000378:metabolism*; D005978:Glutathione / Q000378:metabolism; D006710:Homocysteine / Q000378:metabolism; D006801:Humans; D007291:Inosine Monophosphate / Q000378:metabolism; D042965:Methylenetetrahydrofolate Reductase (NADPH2) / Q000235:genetics / Q000378:metabolism; D008954:Models, Biological; D009154:Mutation; D010920:Placenta / Q000378:metabolism*; D011247:Pregnancy; D012984:Software; D013237:Stereoisomerism; D013654:Taurine / Q000378:metabolism; D013938:Thymidine Monophosphate / Q000378:metabolism
chemical_list: D006710:Homocysteine; D007291:Inosine Monophosphate; D013654:Taurine; D013938:Thymidine Monophosphate; D002244:Carbon; D005492:Folic Acid; D042965:Methylenetetrahydrofolate Reductase (NADPH2); D003541:Cystathionine beta-Synthase; D005978:Glutathione