title: Analysis of full-length sequences of two Citrus yellow mosaic badnavirus isolates infecting Citrus jambhiri (Rough Lemon) and Citrus sinensis L. Osbeck (Sweet Orange) from a nursery in India.
abstract: Citrus yellow mosaic badna virus (CMBV), a member of the Family Caulimoviridae, Genus Badnavirus is the causative agent of mosaic disease among Citrus species in southern India. Despite its reported prevalence in several citrus species, complete information on clear functional genomics or functional information of full-length genomes from all the CMBV isolates infecting citrus species are not available in publicly accessible databases. CMBV isolates from Rough Lemon and Sweet Orange collected from a nursery were cloned and sequenced. The analysis revealed high sequence homology of the two CMBV isolates with previously reported CMBV sequences implying that they represent new variants. Based on computational analysis of the predicted secondary structures, the possible functions of some CMBV proteins have been analyzed.
authors.affiliation: Deparment of Virology, Sri Venkateswara University, Tirupati, AP, India.
authors.forename: A M
authors.initials: AM
authors.lastname: Anthony Johnson
authors.forename: B K
authors.initials: BK
authors.lastname: Borah
authors.forename: D V R
authors.initials: DV
authors.lastname: Sai Gopal
authors.forename: I
authors.initials: I
authors.lastname: Dasgupta
mesh_terms: D000595:Amino Acid Sequence; D019195:Badnavirus / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification / Q000472:pathogenicity; D032084:Citrus sinensis / Q000821:virology*; D003001:Cloning, Molecular; D019295:Computational Biology; D016384:Consensus Sequence; D004279:DNA, Viral / Q000235:genetics; D030541:Databases, Genetic; D016679:Genome, Viral; D007194:India; D008969:Molecular Sequence Data; D016366:Open Reading Frames; D010802:Phylogeny; D010935:Plant Diseases / Q000821:virology*; D017433:Protein Structure, Secondary; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D017386:Sequence Homology, Amino Acid
chemical_list: D004279:DNA, Viral