title: Helicobacter pylori cagL amino acid polymorphisms and its association with gastroduodenal diseases.
abstract: CagL is a pilus protein of Helicobacter pylori that interacts with host cellular α5β1 integrins through its arginine-glycine-aspartate (RGD) motif, guiding proper positioning of the T4SS and translocation of CagA. Deletion or sequence variations of cagL significantly diminished the ability of H. pylori to induce secretion of IL-8 by the host cell. Therefore, this study was undertaken to investigate the association of cagL and its amino acid sequence polymorphisms with gastric cancer (GC), peptic ulcer disease (PUD), and non-ulcer dyspepsia (NUD) as there are no such studies from India. In total, 200 adult patients (NUD 120, PUD 30, GC 50) who underwent an upper gastrointestinal endoscopy were enrolled. H. pylori infection was diagnosed by rapid urease test, culture, histopathology, and PCR. The collected isolates were screened for cagL genotype by PCR and assessed for amino acid sequence polymorphisms using sequence translation. The prevalence of H. pylori infection in study population was 52.5%. Most of the isolates were cagL genopositive (86.6%), and all had RGD motif in their amino acid sequences. D58 and K59 polymorphisms in cagL-genopositive strains were significantly higher in GC patients (P < 0.05). Combined D58K59 polymorphism was associated with higher risk of GC (3.8-fold) when compared to NUD. In conclusion, H. pylori cagL amino acid polymorphisms such as D58K59 are correlated with a higher risk of GC in the Indian population. Further studies are required to know the exact role of particular cagL amino acid polymorphisms in the pathogenicity of H. pylori infection.
authors.affiliation: Department of Microbiology, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow, 226 014, India.
authors.forename: Sanket Kumar
authors.initials: SK
authors.lastname: Shukla
authors.forename: Kashi Nath
authors.initials: KN
authors.lastname: Prasad
authors.forename: Aparna
authors.initials: A
authors.lastname: Tripathi
authors.forename: Virendra
authors.initials: V
authors.lastname: Jaiswal
authors.forename: Jahanarah
authors.initials: J
authors.lastname: Khatoon
authors.forename: Uday Chand
authors.initials: UC
authors.lastname: Ghsohal
authors.forename: Narendra
authors.initials: N
authors.lastname: Krishnani
authors.forename: Nuzhat
authors.initials: N
authors.lastname: Husain
mesh_terms: D000328:Adult; D000595:Amino Acid Sequence; D001426:Bacterial Proteins / Q000235:genetics*; D004415:Dyspepsia / Q000382:microbiology; D016099:Endoscopy, Gastrointestinal; D005838:Genotype; D016481:Helicobacter Infections / Q000453:epidemiology / Q000382:microbiology*; D016480:Helicobacter pylori / Q000235:genetics* / Q000302:isolation & purification / Q000472:pathogenicity; D006801:Humans; D007194:India / Q000453:epidemiology; D008297:Male; D008875:Middle Aged; D010437:Peptic Ulcer / Q000382:microbiology; D016133:Polymerase Chain Reaction; D011110:Polymorphism, Genetic; D015995:Prevalence; D012306:Risk; D017422:Sequence Analysis, DNA; D013274:Stomach Neoplasms / Q000382:microbiology*
chemical_list: D001426:Bacterial Proteins; C568315:cagL protein, Helicobacter pylori