title: Molecular cloning and functional analysis of two FAD2 genes from American grape (Vitis labrusca L.).
abstract: The synthesis of polyunsaturated fatty acids (PUFAs), the most abundant fatty acids in plants, begins with a reaction catalyzed by fatty acid desaturase 2 (FAD2; EC 1.3.1.35), also called microsomal oleate Δ12-desaturase. Since the FAD2 gene was first identified in Arabidopsis thaliana, FAD2 research has gained wide interest as the essential enzyme for synthesizing PUFA. Grapes are one of the most frequently cultivated fruits in the world, with most commercial growers cultivating Vitis vinifera and V. labrusca. Grapeseed oil contains a high proportion, 60-70% of linoleic acid (18:2). We cloned two putative FAD2 genes from V. labrusca cv. Campbell Early based on V. vinifera genome sequences. Deduced amino acid sequences of two putative genes showed that VlFAD2s show high similarity to Arabidopsis FAD2 and commonly contain six transmembrane domain, three histidine boxes and endoplasmic reticulum (ER) retrieval motif representing the characteristics of fatty acid desaturase. Phylogenetic analyses of various plant FAD2s showed that VlFAD2-1 and VlFAD2-2 are separately grouped with constitutive and seed-type FAD2s, respectively. Southern blot showed that one or two bands are found in each lane. Because Campbell Early is a hybrid cultivar, FAD2-1 and FAD2-2 genes may exist as one copy in V. labrusca. Expression analysis in different tissues indicated that VlFAD2-1 is a constitutive gene but VlFAD2-2 is a seed-type gene. Complementation experiments of fad2-1 mutant Arabidopsis with VlFAD2-1 or VlFAD2-2 demonstrated that VlFAD2-1 and VlFAD2-2 can restore low PUFA proportion of fad2 to normal PUFA proportion.
authors.affiliation: Department of Agricultural Biotechnology, National Academy of Agricultural Science, RDA, Suwon 441-707, Republic of Korea.
authors.forename: Kyeong-Ryeol
authors.initials: KR
authors.lastname: Lee
authors.forename: Sun Hee
authors.initials: SH
authors.lastname: Kim
authors.forename: Young-Sam
authors.initials: YS
authors.lastname: Go
authors.forename: Sung Min
authors.initials: SM
authors.lastname: Jung
authors.forename: Kyung Hee
authors.initials: KH
authors.lastname: Roh
authors.forename: Jong-Bum
authors.initials: JB
authors.lastname: Kim
authors.forename: Mi-Chung
authors.initials: MC
authors.lastname: Suh
authors.forename: Sukchan
authors.initials: S
authors.lastname: Lee
authors.forename: Hyun Uk
authors.initials: HU
authors.lastname: Kim
mesh_terms: D000595:Amino Acid Sequence; D017360:Arabidopsis / Q000201:enzymology*; D015139:Blotting, Southern; D015153:Blotting, Western; D003001:Cloning, Molecular; D044943:Fatty Acid Desaturases / Q000235:genetics* / Q000378:metabolism*; D005816:Genetic Complementation Test; D008861:Microsomes / Q000201:enzymology*; D008969:Molecular Sequence Data; D010802:Phylogeny; D012333:RNA, Messenger / Q000235:genetics; D060888:Real-Time Polymerase Chain Reaction; D020133:Reverse Transcriptase Polymerase Chain Reaction; D012639:Seeds / Q000201:enzymology*; D017386:Sequence Homology, Amino Acid; D027843:Vitis / Q000201:enzymology*
chemical_list: D012333:RNA, Messenger; D044943:Fatty Acid Desaturases