title: Ten years of standardizing proteomic data: a report on the HUPO-PSI Spring Workshop: April 12-14th, 2012, San Diego, USA.
abstract: The Human Proteome Organisation Proteomics Standards Initiative (HUPO-PSI) was established in 2002 with the aim of defining community standards for data representation in proteomics and facilitating data comparison, exchange and verification. Over the last 10 years significant advances have been made, with common data standards now published and implemented in the field of both mass spectrometry and molecular interactions. The 2012 meeting further advanced this work, with the mass spectrometry groups finalising approaches to capturing the output from recent developments in the field, such as quantitative proteomics and SRM. The molecular interaction group focused on improving the integration of data from multiple resources. Both groups united with a guest work track, organized by the HUPO Technology/Standards Committee, to formulate proposals for data submissions from the HUPO Human Proteome Project and to start an initiative to collect standard experimental protocols.
authors.affiliation: EMBL Outstation - European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.
authors.forename: Sandra
authors.initials: S
authors.lastname: Orchard
authors.forename: Pierre-Alain
authors.initials: PA
authors.lastname: Binz
authors.forename: Christoph
authors.initials: C
authors.lastname: Borchers
authors.forename: Michael K
authors.initials: MK
authors.lastname: Gilson
authors.forename: Andrew R
authors.initials: AR
authors.lastname: Jones
authors.forename: George
authors.initials: G
authors.lastname: Nicola
authors.forename: Juan Antonio
authors.initials: JA
authors.lastname: Vizcaino
authors.forename: Eric W
authors.initials: EW
authors.lastname: Deutsch
authors.forename: Henning
authors.initials: H
authors.lastname: Hermjakob
mesh_terms: D017408:Guidelines as Topic; D049674:History, 21st Century; D006801:Humans; D013058:Mass Spectrometry / Q000266:history / Q000592:standards; D020543:Proteome / Q000266:history / Q000592:standards*; D040901:Proteomics / Q000193:education* / Q000266:history / Q000592:standards*; D014481:United States
chemical_list: D020543:Proteome