title: Single-cell-type proteomics: toward a holistic understanding of plant function.
abstract: Multicellular organisms such as plants contain different types of cells with specialized functions. Analyzing the protein characteristics of each type of cell will not only reveal specific cell functions, but also enhance understanding of how an organism works. Most plant proteomics studies have focused on using tissues and organs containing a mixture of different cells. Recent single-cell-type proteomics efforts on pollen grains, guard cells, mesophyll cells, root hairs, and trichomes have shown utility. We expect that high resolution proteomic analyses will reveal novel functions in single cells. This review provides an overview of recent developments in plant single-cell-type proteomics. We discuss application of the approach for understanding important cell functions, and we consider the technical challenges of extending the approach to all plant cell types. Finally, we consider the integration of single-cell-type proteomics with transcriptomics and metabolomics with the goal of providing a holistic understanding of plant function.
authors.affiliation: Department of Biology, Plant Molecular and Cellular Biology Program, Genetics Institute, University of Florida, Gainesville, FL 32610, USA.
authors.forename: Shaojun
authors.initials: S
authors.lastname: Dai
authors.forename: Sixue
authors.initials: S
authors.lastname: Chen
mesh_terms: D058503:Mesophyll Cells / Q000166:cytology; D055432:Metabolomics; D059828:Plant Cells; D010940:Plant Proteins / Q000032:analysis*; D018517:Plant Roots / Q000166:cytology; D010944:Plants; D011058:Pollen / Q000166:cytology; D040901:Proteomics / Q000379:methods*; D059467:Transcriptome
chemical_list: D010940:Plant Proteins