title: Metal-ion dependent catalytic properties of Sulfolobus solfataricus class ii α-mannosidase.
abstract: The active site for the family GH38 class II α-mannosidase is constituted in part by a divalent metal ion, mostly Zn(2+), as revealed in the crystal structures of enzymes from both animal and bacterial sources. The metal ion coordinates to the bound substrate and side chains of conserved amino acid residues. Recently, evidence has accumulated that class II α-mannosidase is active in complex with a range of divalent metal ions. In the present work, with employment of the class II α-mannosidase, ManA, from the hyperthermophilic archaeon Sulfolobus solfataricus, we explored the influence of the divalent metal ion on the associated steady-state kinetic parameters, K(M) and k(cat), for various substrates. With p-nitrophenyl-α-d-mannoside as a substrate, the enzyme showed activity in the presence of Co(2+), Cd(2+), Mn(2+), and Zn(2+), whereas Ni(2+) and Cu(2+) were inhibitory and nonactivating. Co(2+) was the preferred metal ion, with a k(cat)/K(M) value of about 120 mM(-1) s(-1), 6 times higher than that with Cd(2+) and Zn(2+) and 10 times higher than that with Mn(2+). With α-1,2-, α-1,3-, α-1,4-, or α-1,6-mannobiose as a substrate, Co(2+) was the only metal ion promoting hydrolysis of all substrates; however, Mn(2+), Cd(2+), and Zn(2+) could substitute to a varying extent. A change in the divalent metal ion generally affected the K(M) for the hydrolysis of p-nitrophenyl-α-d-mannoside; however, changes in both k(cat) and K(M) for the hydrolysis of α-mannobioses were observed, along with changing preferences for the glycosidic linkage. Finally, it was found that the metal ion and substrate bind in that order via a steady-state, ordered, sequential mechanism.
authors.affiliation: Nano-Science Center, Department of Chemistry, University of Copenhagen , Universitetsparken 5, DK-2300 Copenhagen Ø, Denmark.
authors.forename: Jonas Willum
authors.initials: JW
authors.lastname: Nielsen
authors.forename: Nina Rødtness
authors.initials: NR
authors.lastname: Poulsen
authors.forename: Anna
authors.initials: A
authors.lastname: Johnsson
authors.forename: Jakob Rahr
authors.initials: JR
authors.lastname: Winther
authors.forename: S L S
authors.initials: SL
authors.lastname: Stipp
authors.forename: Martin
authors.initials: M
authors.lastname: Willemoës
mesh_terms: D001426:Bacterial Proteins / Q000145:classification* / Q000235:genetics / Q000378:metabolism*; D020134:Catalytic Domain; D015964:Gene Expression Regulation, Bacterial; D015971:Gene Expression Regulation, Enzymologic; D008670:Metals / Q000737:chemistry / Q000378:metabolism*; D008958:Models, Molecular; D008969:Molecular Sequence Data; D011487:Protein Conformation; D013379:Substrate Specificity; D048229:Sulfolobus solfataricus / Q000201:enzymology*; D043323:alpha-Mannosidase / Q000145:classification* / Q000235:genetics / Q000378:metabolism*
chemical_list: D001426:Bacterial Proteins; D008670:Metals; D043323:alpha-Mannosidase