title: Bacteriophage ecology in a commercial cucumber fermentation.
abstract: To reduce high-salt waste from cucumber fermentations, low-salt fermentations are under development. These fermentations may require the use of starter cultures to ensure normal fermentations. Because potential phage infection can cause starter culture failure, it is important to understand phage ecology in the fermentations. This study investigated the phage ecology in a commercial cucumber fermentation. Brine samples taken from a fermentation tank over a 90-day period were plated onto deMan-Rogosa-Sharpe agar plates. A total of 576 lactic acid bacterial isolates were randomly selected to serve as potential hosts for phage isolation. Filtered brine served as a phage source. Fifty-seven independent phage isolates were obtained, indicating that 10% of the bacterial isolates were sensitive to phage attack. Phage hosts include Lactobacillus brevis (67% of all hosts), Lactobacillus plantarum (21%), Weissella paramesenteroides, Weissella cibaria, and Pediococcus ethanolidurans. Nearly 50% of phages were isolated on day 14, and the majority of them attacked L. brevis. Some phages had a broad host range and were capable of infecting multiple hosts in two genera. Other phages were species specific or strain specific. About 30% of phage isolates produced turbid pinpoint plaques or only caused reduced cell growth on the bacterial lawns. Six phages with distinct host ranges were characterized. The data from this study showed that abundant and diverse phages were present in the commercial cucumber fermentation, which could cause significant mortality to the lactic acid bacteria population. Therefore, a phage control strategy may be needed in low-salt cucumber fermentations.
authors.affiliation: Department of Biology and Physics, Kennesaw State University, Kennesaw, Georgia, USA. jean_lu@kennesaw.edu
authors.forename: Z
authors.initials: Z
authors.lastname: Lu
authors.forename: I M
authors.initials: IM
authors.lastname: Pérez-Díaz
authors.forename: J S
authors.initials: JS
authors.lastname: Hayes
authors.forename: F
authors.initials: F
authors.lastname: Breidt
mesh_terms: D001435:Bacteriophages / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification*; D058448:Biota; D018553:Cucumis sativus / Q000378:metabolism*; D004279:DNA, Viral / Q000737:chemistry / Q000235:genetics; D005285:Fermentation; D005516:Food Microbiology; D007778:Lactobacillus / Q000821:virology; D008969:Molecular Sequence Data; D010376:Pediococcus / Q000821:virology; D017422:Sequence Analysis, DNA; D058836:Weissella / Q000821:virology
chemical_list: D004279:DNA, Viral