Hepatitis E virus from India exhibits significant amino acid mutations in fulminant hepatic failure patients.
In India, hepatitis E virus (HEV) is the predominant cause of acute viral hepatitis (AVH) and fulminant hepatic failure (FHF) among pregnant women and adults. The present study evaluates association, if any, of the mutations in the viral genome with disease outcome. Ten genotype-1 complete genomes (five each from AVH and FHF patients) were sequenced. Phylogenetic analysis showed a distinct cluster including all five FHF-HEV sequences from western India (present study), one FHF isolate from northern India, and one AVH isolate detected in 2010 (present study). HEV genotype-1 sequences from fulminant cases exhibited 150 significantly different (p ≤ 0.05) nucleotide substitutions when compared to all genotype-1-AVH sequences as well as isolates from the Indian subcontinent. At six positions, all FHF sequences showed identical substitutions (1 non-synonymous). Six amino acid changes in ORF1; F179S, A317T, T735I, L1110F, V1120I, and F1439Y were significantly associated with HEV-type-1 FHF. The data suggests that the nucleotide substitutions recorded and/or L1110F and V1120I amino acid substitutions in helicase domain may play important role in determining outcome of HEV infection.
Hepatitis Group, National Institute of Virology, 130/1, Sus Road, Pashan, Pune, Maharashtra, India.
Nischay
N
Mishra
Atul M
AM
Walimbe
Vidya A
VA
Arankalle
D000328:Adult; D016000:Cluster Analysis; D005260:Female; D016679:Genome, Viral; D016751:Hepatitis E / Q000821:virology*; D016752:Hepatitis E virus / Q000235:genetics* / Q000302:isolation & purification; D006801:Humans; D007194:India; D017114:Liver Failure, Acute / Q000821:virology*; D008297:Male; D008875:Middle Aged; D008969:Molecular Sequence Data; D020125:Mutation, Missense; D010802:Phylogeny; D011247:Pregnancy; D012367:RNA, Viral / Q000235:genetics*; D017422:Sequence Analysis, DNA; D055815:Young Adult
D012367:RNA, Viral