Nontargeted metabolite profiling in compatible pathogen-inoculated tobacco (Nicotiana tabacum L. cv. Wisconsin 38) using UPLC-Q-TOF/MS.
A biphasic reactive oxygen species (ROS) production has previously been observed in tobacco at 1 and 48 h after inoculation with the hemibiotrophic compatible pathogen, Phytophthora parasitica var. nicotianae (Ppn). To characterize the response of tobacco to biphasically produced ROS concerning the propagation of Ppn, ultraperformance liquid chromatography-quadrupole-time of flight/ mass spectrometry (UPLC-Q-TOF/MS) based metabolic profiling combined with multivariate statistical analysis was performed. Among the nonredundant 355 mass ions in ESI+ mode and 345 mass ions in ESI- mode that were selected as significantly changed by Ppn inoculation (|p(corr)| > 0.6 on S-plot of orthogonal partial least-squares discriminant analysis (OPLS-DA), fold-change > 2, and p < 0.05 in the independent two-sample t test), 76 mass ions were identified on the basis of their accurate mass ions and MS/MS spectra. Phenolic amino acids, phenylpropanoids, hydroxycinnamic acid amides, linoleic acid, linolenic acid, lysophospholipids, glycoglycerolipids, and trioxidized phospholipids were identified as having changed after Ppn inoculation. On the basis of their quantitative changes, the metabolic responses occurring at each phase of ROS production after Ppn inoculation were investigated in this study.
Seoul Center, Korea Basic Science Institute (KBSI), Seoul 136-713, Republic of Korea.
Kyoungwon
K
Cho
Yuran
Y
Kim
Soo Jin
SJ
Wi
Jong Bok
JB
Seo
Joseph
J
Kwon
Joo Hee
JH
Chung
Ky Young
KY
Park
Myung Hee
MH
Nam
D000596:Amino Acids / Q000378:metabolism; D002853:Chromatography, Liquid / Q000379:methods*; D008055:Lipids / Q000032:analysis; D055442:Metabolome; D053719:Tandem Mass Spectrometry / Q000379:methods*; D014026:Nicotiana / Q000378:metabolism*
D000596:Amino Acids; D008055:Lipids