title: Transcriptome profiling analysis using rice oligonucleotide microarrays.
abstract: Transcriptome analysis using oligonucleotide microarrays is a powerful tool for detecting changes in genome-wide transcripts under a given biological condition. Although the rice genome sequence is available, the number of functionally characterized genes in rice is still very limited. Genome-wide transcriptome analysis is a useful tool for elucidating the functions of rice genes that have not yet been determined. Currently, more than 3,000 arrays are publicly available. Here, we introduce methods for genome-wide transcriptome analysis in rice.
authors.affiliation: Department of Plant Pathology, University of California, Davis, CA, USA.
authors.forename: Ki-Hong
authors.initials: KH
authors.lastname: Jung
authors.forename: Pamela C
authors.initials: PC
authors.lastname: Ronald
mesh_terms: D019295:Computational Biology / Q000379:methods; D005456:Fluorescent Dyes / Q000737:chemistry; D020869:Gene Expression Profiling; D018506:Gene Expression Regulation, Plant; D020407:Internet; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D012275:Oryza / Q000235:genetics*; D015347:RNA Probes / Q000737:chemistry; D018749:RNA, Plant / Q000302:isolation & purification; D012984:Software; D013194:Staining and Labeling / Q000379:methods
chemical_list: D005456:Fluorescent Dyes; D015347:RNA Probes; D018749:RNA, Plant