title: Effects of stochasticity in early life history on steepness and population growth rate estimates: an illustration on Atlantic bluefin tuna.
abstract: The intrinsic population growth rate (r) of the surplus production function used in the biomass dynamic model and the steepness (h) of the stock-recruitment relationship used in age-structured population dynamics models are two key parameters in fish stock assessment. There is generally insufficient information in the data to estimate these parameters that thus have to be constrained. We developed methods to directly estimate the probability distributions of r and h for the Atlantic bluefin tuna (Thunnus thynnus, Scombridae), using all available biological and ecological information. We examined the existing literature to define appropriate probability distributions of key life history parameters associated with intrinsic growth rate and steepness, paying particular attention to the natural mortality for early life history stages. The estimated probability distribution of the population intrinsic growth rate was weakly informative, with an estimated mean r = 0.77 (±0.53) and an interquartile range of (0.34, 1.12). The estimated distribution of h was more informative, but also strongly asymmetric with an estimated mean h = 0.89 (±0.20) and a median of 0.99. We note that these two key demographic parameters strongly depend on the distribution of early life history mortality rate (M(0)), which is known to exhibit high year-to-year variations. This variability results in a widely spread distribution of M(0) that affects the distribution of the intrinsic population growth rate and further makes the spawning stock biomass an inadequate proxy to predict recruitment levels.
authors.affiliation: AgroParistech-ENGREF (École Nationale du Génie Rural des Eaux et des Forêts), Paris, France. maximilien.simon@ifremer.fr
authors.forename: Maximilien
authors.initials: M
authors.lastname: Simon
authors.forename: Jean-Marc
authors.initials: JM
authors.lastname: Fromentin
authors.forename: Sylvain
authors.initials: S
authors.lastname: Bonhommeau
authors.forename: Daniel
authors.initials: D
authors.lastname: Gaertner
authors.forename: Jon
authors.initials: J
authors.lastname: Brodziak
authors.forename: Marie-Pierre
authors.initials: MP
authors.lastname: Etienne
mesh_terms: D000465:Algorithms; D000818:Animals; D001267:Atlantic Ocean; D018533:Biomass; D017753:Ecosystem; D005260:Female; D005298:Fertility; D005398:Fisheries / Q000379:methods / Q000706:statistics & numerical data*; D008018:Life Cycle Stages; D008297:Male; D008954:Models, Biological; D011157:Population Dynamics; D011158:Population Growth; D013269:Stochastic Processes; D013997:Time Factors; D014413:Tuna / Q000254:growth & development*