title: TropGeneDB, the multi-tropical crop information system updated and extended.
abstract: TropGeneDB (http://tropgenedb.cirad.fr) was created to store genetic, molecular and phenotypic data on tropical crop species. The most common data stored in TropGeneDB are molecular markers, quantitative trait loci, genetic and physical maps, genetic diversity, phenotypic diversity studies and information on genetic resources (geographic origin, parentage, collection). TropGeneDB is organized on a crop basis with currently nine public modules (banana, cocoa, coconut, coffee, cotton, oil palm, rice, rubber tree, sugarcane). Crop-specific Web consultation interfaces have been designed to allow quick consultations and personalized complex queries. TropGeneDB is a component of the South Green Bioinformatics Platform (http://southgreen.cirad.fr/).
authors.affiliation: CIRAD, UMR AGAP, F-34398 Montpellier, France. chantal.hamelin@cirad.fr
authors.forename: Chantal
authors.initials: C
authors.lastname: Hamelin
authors.forename: Guilhem
authors.initials: G
authors.lastname: Sempere
authors.forename: Vincent
authors.initials: V
authors.lastname: Jouffe
authors.forename: Manuel
authors.initials: M
authors.lastname: Ruiz
mesh_terms: D002874:Chromosome Mapping; D018556:Crops, Agricultural / Q000235:genetics*; D030561:Databases, Nucleic Acid; D017343:Genes, Plant; D005819:Genetic Markers; D014644:Genetic Variation; D020407:Internet; D010641:Phenotype; D040641:Quantitative Trait Loci; D014329:Tropical Climate; D014584:User-Computer Interface
chemical_list: D005819:Genetic Markers