title: Bioclipse-R: integrating management and visualization of life science data with statistical analysis.
abstract: CONCLUSIONS
  Bioclipse, a graphical workbench for the life sciences, provides functionality for managing and visualizing life science data. We introduce Bioclipse-R, which integrates Bioclipse and the statistical programming language R. The synergy between Bioclipse and R is demonstrated by the construction of a decision support system for anticancer drug screening and mutagenicity prediction, which shows how Bioclipse-R can be used to perform complex tasks from within a single software system.
  
  
  METHODS
  Bioclipse-R is implemented as a set of Java plug-ins for Bioclipse based on the R-package rj. Source code and binary packages are available from https://github.com/bioclipse and http://www.bioclipse.net/bioclipse-r, respectively.
  
  
  BACKGROUND
  martin.eklund@farmbio.uu.se
  
  
  BACKGROUND
  Supplementary data are available at Bioinformatics online.
authors.affiliation: Department of Pharmaceutical Biosciences, Uppsala University, SE-751 24 Uppsala, Sweden.
authors.forename: Ola
authors.initials: O
authors.lastname: Spjuth
authors.forename: Valentin
authors.initials: V
authors.lastname: Georgiev
authors.forename: Lars
authors.initials: L
authors.lastname: Carlsson
authors.forename: Jonathan
authors.initials: J
authors.lastname: Alvarsson
authors.forename: Arvid
authors.initials: A
authors.lastname: Berg
authors.forename: Egon
authors.initials: E
authors.lastname: Willighagen
authors.forename: Jarl E S
authors.initials: JE
authors.lastname: Wikberg
authors.forename: Martin
authors.initials: M
authors.lastname: Eklund
mesh_terms: D000970:Antineoplastic Agents / Q000737:chemistry / Q000494:pharmacology / Q000633:toxicity; D001690:Biological Science Disciplines; D003196:Computer Graphics; D003627:Data Interpretation, Statistical; D016296:Mutagenesis; D011381:Programming Languages; D021281:Quantitative Structure-Activity Relationship; D012984:Software; D018511:Systems Integration
chemical_list: D000970:Antineoplastic Agents