title: Tract profiles of white matter properties: automating fiber-tract quantification.
abstract: Tractography based on diffusion weighted imaging (DWI) data is a method for identifying the major white matter fascicles (tracts) in the living human brain. The health of these tracts is an important factor underlying many cognitive and neurological disorders. In vivo, tissue properties may vary systematically along each tract for several reasons: different populations of axons enter and exit the tract, and disease can strike at local positions within the tract. Hence quantifying and understanding diffusion measures along each fiber tract (Tract Profile) may reveal new insights into white matter development, function, and disease that are not obvious from mean measures of that tract. We demonstrate several novel findings related to Tract Profiles in the brains of typically developing children and children at risk for white matter injury secondary to preterm birth. First, fractional anisotropy (FA) values vary substantially within a tract but the Tract FA Profile is consistent across subjects. Thus, Tract Profiles contain far more information than mean diffusion measures. Second, developmental changes in FA occur at specific positions within the Tract Profile, rather than along the entire tract. Third, Tract Profiles can be used to compare white matter properties of individual patients to standardized Tract Profiles of a healthy population to elucidate unique features of that patient's clinical condition. Fourth, Tract Profiles can be used to evaluate the association between white matter properties and behavioral outcomes. Specifically, in the preterm group reading ability is positively correlated with FA measured at specific locations on the left arcuate and left superior longitudinal fasciculus and the magnitude of the correlation varies significantly along the Tract Profiles. We introduce open source software for automated fiber-tract quantification (AFQ) that measures Tract Profiles of MRI parameters for 18 white matter tracts. With further validation, AFQ Tract Profiles have potential for informing clinical management and decision-making.
authors.affiliation: Department of Psychology, Stanford University, Stanford, California, United States of America. jyeatman@stanford.edu
authors.forename: Jason D
authors.initials: JD
authors.lastname: Yeatman
authors.forename: Robert F
authors.initials: RF
authors.lastname: Dougherty
authors.forename: Nathaniel J
authors.initials: NJ
authors.lastname: Myall
authors.forename: Brian A
authors.initials: BA
authors.lastname: Wandell
authors.forename: Heidi M
authors.initials: HM
authors.lastname: Feldman
mesh_terms: D000293:Adolescent; D001921:Brain / Q000473:pathology / Q000502:physiology*; D002648:Child; D002675:Child, Preschool; D002658:Developmental Disabilities / Q000175:diagnosis; D038524:Diffusion Magnetic Resonance Imaging; D004410:Dyslexia; D005260:Female; D059907:Functional Neuroimaging; D006801:Humans; D007223:Infant; D007231:Infant, Newborn; D007234:Infant, Premature; D008297:Male; D009412:Nerve Fibers / Q000737:chemistry; D009434:Neural Pathways; D013116:Spinal Cord / Q000502:physiology*