title: InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor.
abstract: Genomics datasets are increasingly useful for gaining biomedical insights, with adoption in the clinic underway. However, multiple hurdles related to data management stand in the way of their efficient large-scale utilization. The solution proposed is a web-based data storage hub. Having clear focus, flexibility and adaptability, InSilico DB seamlessly connects genomics dataset repositories to state-of-the-art and free GUI and command-line data analysis tools. The InSilico DB platform is a powerful collaborative environment, with advanced capabilities for biocuration, dataset sharing, and dataset subsetting and combination. InSilico DB is available from https://insilicodb.org.
authors.forename: Alain
authors.initials: A
authors.lastname: Coletta
authors.forename: Colin
authors.initials: C
authors.lastname: Molter
authors.forename: Robin
authors.initials: R
authors.lastname: Duqué
authors.forename: David
authors.initials: D
authors.lastname: Steenhoff
authors.forename: Jonatan
authors.initials: J
authors.lastname: Taminau
authors.forename: Virginie
authors.initials: V
authors.lastname: de Schaetzen
authors.forename: Stijn
authors.initials: S
authors.lastname: Meganck
authors.forename: Cosmin
authors.initials: C
authors.lastname: Lazar
authors.forename: David
authors.initials: D
authors.lastname: Venet
authors.forename: Vincent
authors.initials: V
authors.lastname: Detours
authors.forename: Ann
authors.initials: A
authors.lastname: Nowé
authors.forename: Hugues
authors.initials: H
authors.lastname: Bersini
authors.forename: David Y
authors.initials: DY
authors.lastname: Weiss Solís
mesh_terms: D030541:Databases, Genetic; D016678:Genome; D023281:Genomics / Q000379:methods*; D006801:Humans; D009369:Neoplasms / Q000235:genetics*; D012984:Software; D064878:Web Browser