title: Allele specific expression of the transthyretin gene in swedish patients with hereditary transthyretin amyloidosis (ATTR V30M) is similar between the two alleles.
abstract: BACKGROUND
  Hereditary transthyretin (TTR) amyloidosis (ATTR) is an autosomal dominant disease characterized by extracellular deposits of amyloid fibrils composed of misfolded TTR. The differences in penetrance and age at onset are vast, both between and within populations, with a generally late onset for Swedish carriers. In a recent study the entire TTR gene including the 3' UTR in Swedish, French and Japanese ATTR patients was sequenced. The study disclosed a SNP in the V30M TTR 3' UTR of the Swedish ATTR population that was not present in either the French or the Japanese populations (rs62093482-C>T). This SNP could create a new binding site for miRNA, which would increase degradation of the mutated TTR's mRNA thus decrease variant TTR formation and thereby delay the onset of the disease. The aim of the present study was to disclose differences in allele specific TTR expression among Swedish V30M patients, and to see if selected miRNA had any effect upon the expression.
  
  
  RESULTS
  Allele-specific expression was measured on nine liver biopsies from Swedish ATTR patients using SNaPshot Multiplex assay. Luciferase activity was measured on cell lines transfected with constructs containing the TTR 3' UTR. Allele-specific expression measured on liver biopsies from Swedish ATTR patients showed no difference in expression between the two alleles. Neither was there any difference in expression between cell lines co-transfected with two constructs with or without the TTR 3' UTR SNP regardless of added miRNA.
  
  
  CONCLUSIONS
  The SNP found in the 3' UTR of the TTR gene has no effect on degrading the variant allele's expression and thus has no impact on the diminished penetrance of the trait in the Swedish population. However, the 3' UTR SNP is unique for patients descending from the Swedish founder, and this SNP could be utilized to identify ATTR patients of Swedish descent.
authors.affiliation: Department of Public Health and Clinical Medicine, Umeå University, Umeå, Sweden. nina.norgren@medicin.umu.se
authors.forename: Nina
authors.initials: N
authors.lastname: Norgren
authors.forename: Urban
authors.initials: U
authors.lastname: Hellman
authors.forename: Bo Göran
authors.initials: BG
authors.lastname: Ericzon
authors.forename: Malin
authors.initials: M
authors.lastname: Olsson
authors.forename: Ole B
authors.initials: OB
authors.lastname: Suhr
mesh_terms: D020413:3' Untranslated Regions / Q000235:genetics; D000368:Aged; D000483:Alleles; D000682:Amyloid; D028227:Amyloid Neuropathies, Familial / Q000097:blood / Q000235:genetics / Q000473:pathology; D001665:Binding Sites / Q000235:genetics; D005260:Female; D005786:Gene Expression Regulation; D006801:Humans; D008297:Male; D035683:MicroRNAs / Q000235:genetics / Q000378:metabolism; D008875:Middle Aged; D020641:Polymorphism, Single Nucleotide; D011228:Prealbumin / Q000737:chemistry / Q000235:genetics* / Q000378:metabolism; D059748:Proteolysis; D013548:Sweden
chemical_list: D020413:3' Untranslated Regions; D000682:Amyloid; D035683:MicroRNAs; D011228:Prealbumin