title: Support vector machines to model presence/absence of Alburnus alburnus alborella (Teleostea, Cyprinidae) in North-Western Italy: comparison with other machine learning techniques.
abstract: Alburnus alburnus alborella is a fish species native to northern Italy. It has suffered a very sharp decrease in population over the last 20 years due to human impact. Therefore, it was selected for reintroduction projects. In this research project, support vector machines (SVM) were tested as possible tools for building reliable models of presence/absence of the species. A system of 198 sites located along the rivers of Piedmont in North-Western Italy was investigated. At each site, 19 physical-chemical and environmental variables were measured. We verified that performances did not improve after feature selection but, instead, they slightly decreased (from Correctly Classified Instances [CCI]=84.34 and Cohen's k [k]=0.69 to CCI=82.81 and k=0.66). However, feature selection is crucial in identifying the relevant features for the presence/absence of the species. We then compared SVMs performances with decision trees (DTs) and artificial neural networks (ANNs) built using the same dataset. SVMs outperformed DTs (CCI=81.39 and k=0.63) but not ANNs (CCI=83.03 and k=0.66), showing that SVMs and ANNs are the best performing models, proving that their application in freshwater management is more promising than traditional and other machine-learning techniques.
authors.affiliation: Life Sciences and Systems Biology Department, Università degli Studi di Torino, Via Accademia Albertina 13, 10123 Torino, Italy. santina.tirelli@unito.it
authors.forename: Tina
authors.initials: T
authors.lastname: Tirelli
authors.forename: Marco
authors.initials: M
authors.lastname: Gamba
authors.forename: Daniela
authors.initials: D
authors.lastname: Pessani
mesh_terms: D000465:Algorithms; D000818:Animals; D001185:Artificial Intelligence; D003530:Cyprinidae / Q000033:anatomy & histology / Q000145:classification* / Q000235:genetics; D003627:Data Interpretation, Statistical; D057225:Data Mining; D030541:Databases, Genetic; D005618:Fresh Water; D007558:Italy; D008957:Models, Genetic; D016571:Neural Networks, Computer; D011153:Population; D015203:Reproducibility of Results; D060388:Support Vector Machine