title: Digging deeper into the field of the small cell lung cancer tumor marker ProGRP: a method for differentiation of its isoforms.
abstract: In this paper, we have used a newly developed immunocapture and LC-MS method to demonstrate for the first time the presence of protein isoforms 1 and 3 of the small cell lung cancer (SCLC) marker progastrin-releasing peptide (ProGRP) in sera. In addition, the method allows for indirect determination of the relative presence of the other known isoform of ProGRP, also known as ProGRP isoform 2. This new method is able to determine total ProGRP as a marker in sera at clinically relevant levels and to differentiate between isoforms at the low-pM level through combining selective sample preparation by immunoextraction, tryptic digestion, and separation followed by detection with LC-SRM-MS of the signature peptides, NLLGLIEAK (total ProGRP), LSAPGSQR (ProGRP isoform 1), and DLVDSLLQVLNVK (ProGRP isoform 3), with accuracies ≤ 25% for lower limit of quantification (LLOQ) and precisions ≤ 33%. By analyzing serum samples from four patients diagnosed with SCLC using the here described new and fully validated method, the ability is shown to both determine total ProGRP concentration and to differentiate between ProGRP isoforms 1 and 3 in one single run. Quantification of various ProGRP isoforms in one single run may be helpful for further understanding of the underlying biochemical processes in SCLC and differentiation of small cell lung cancer.
authors.affiliation: Department of Pharmaceutical Chemistry, School of Pharmacy, University of Oslo, Oslo, Norway.
authors.forename: Silje Bøen
authors.initials: SB
authors.lastname: Torsetnes
authors.forename: Marianne Sparby
authors.initials: MS
authors.lastname: Nordlund
authors.forename: Elisabeth
authors.initials: E
authors.lastname: Paus
authors.forename: Trine Grønhaug
authors.initials: TG
authors.lastname: Halvorsen
authors.forename: Léon
authors.initials: L
authors.lastname: Reubsaet
mesh_terms: D014408:Biomarkers, Tumor / Q000097:blood; D002853:Chromatography, Liquid; D006801:Humans; D008175:Lung Neoplasms / Q000097:blood / Q000473:pathology; D013058:Mass Spectrometry; D010446:Peptide Fragments / Q000097:blood / Q000235:genetics / Q000302:isolation & purification; D010455:Peptides / Q000097:blood / Q000235:genetics / Q000302:isolation & purification; D020033:Protein Isoforms / Q000097:blood / Q000235:genetics / Q000302:isolation & purification; D011994:Recombinant Proteins / Q000097:blood / Q000235:genetics / Q000302:isolation & purification; D055752:Small Cell Lung Carcinoma / Q000378:metabolism
chemical_list: D014408:Biomarkers, Tumor; D010446:Peptide Fragments; D010455:Peptides; D020033:Protein Isoforms; D011994:Recombinant Proteins; C087079:pro-gastrin-releasing peptide (31-98)