title: Detection of Vibrio parahaemolyticus in food samples using in situ loop-mediated isothermal amplification method.
abstract: A novel in situ loop-mediated isothermal amplification (in situ LAMP) technique for rapid detection of the food-borne Vibrio parahaemolyticus strains had been developed and evaluated in this study. The sensitivity of the in situ LAMP assay was detected to be 10 CFU/reaction via test in serial 10-fold dilutions of V. parahaemolyticus cells, and high specificity had also been obtained through confirmation with 14 reference gram-positive and -negative strains. Application of the established in situ LAMP assay had been performed on 58 strains previously isolated from seafood samples, including 48 V. parahaemolyticus and 10 non-V. parahaemolyticus strains. Of 48 V. parahaemolyticus strains, 48, 45 and 34 strains were detected as positive by in situ LAMP, regular LAMP and PCR, respectively, with the detection rate and negative predictive value (NPV) found to be 100% vs 93.8% vs 70.8% and 100% vs 76.9% vs 41.7%. In addition, none of the tested non-V. parahaemolyticus strains showed positive result, indicating a 100% positive predictive value (PPV) for all of 3 assays. Compared with regular LAMP methods and PCR-based methods, the in situ LAMP assay is advantageous on rapidity, high specificity, less time consumption and ease in operation, and may provide a novel, useful and practical detection platform for pathogens in food safety laboratories.
authors.affiliation: Food Safety Key Laboratory of Guangdong Province, College of Food Science, South China Agricultural University, 510642 Guangzhou, China. blacktamato@hotmail.com
authors.forename: Li
authors.initials: L
authors.lastname: Wang
authors.forename: Lei
authors.initials: L
authors.lastname: Shi
authors.forename: Jianyu
authors.initials: J
authors.lastname: Su
authors.forename: Yuxin
authors.initials: Y
authors.lastname: Ye
authors.forename: Qingping
authors.initials: Q
authors.lastname: Zhong
mesh_terms: D001426:Bacterial Proteins / Q000235:genetics; D005516:Food Microbiology; D005798:Genes, Bacterial; D006460:Hemolysin Proteins / Q000235:genetics; D057230:Limit of Detection; D021141:Nucleic Acid Amplification Techniques / Q000592:standards*; D012015:Reference Standards; D017747:Seafood / Q000382:microbiology*; D014736:Vibrio parahaemolyticus / Q000235:genetics* / Q000302:isolation & purification
chemical_list: D001426:Bacterial Proteins; D006460:Hemolysin Proteins