title: A three-parameter model for classifying anurans into four genera based on advertisement calls.
abstract: The vocalizations of anurans are innate in structure and may therefore contain indicators of phylogenetic history. Thus, advertisement calls of species which are more closely related phylogenetically are predicted to be more similar than those of distant species. This hypothesis was evaluated by comparing several widely used machine-learning algorithms. Recordings of advertisement calls from 142 species belonging to four genera were analyzed. A logistic regression model, using mean values for dominant frequency, coefficient of variation of root-mean square energy, and spectral flux, correctly classified advertisement calls with regard to genus with an accuracy above 70%. Similar accuracy rates were obtained using these parameters with a support vector machine model, a K-nearest neighbor algorithm, and a multivariate Gaussian distribution classifier, whereas a Gaussian mixture model performed slightly worse. In contrast, models based on mel-frequency cepstral coefficients did not fare as well. Comparable accuracy levels were obtained on out-of-sample recordings from 52 of the 142 original species. The results suggest that a combination of low-level acoustic attributes is sufficient to discriminate efficiently between the vocalizations of these four genera, thus supporting the initial premise and validating the use of high-throughput algorithms on animal vocalizations to evaluate phylogenetic hypotheses.
authors.affiliation: Department of Cognitive Biology, University of Vienna, Althanstrasse 14, Vienna A-1090, Austria. bruno.gingras@univie.ac.at
authors.forename: Bruno
authors.initials: B
authors.lastname: Gingras
authors.forename: William Tecumseh
authors.initials: WT
authors.lastname: Fitch
mesh_terms: D000465:Algorithms; D000818:Animals; D001001:Anura / Q000145:classification / Q000502:physiology*; D016015:Logistic Models; D008297:Male; D015233:Models, Statistical; D015999:Multivariate Analysis; D010802:Phylogeny; D015203:Reproducibility of Results; D012815:Signal Processing, Computer-Assisted; D013018:Sound Spectrography; D013045:Species Specificity; D060388:Support Vector Machine; D013997:Time Factors; D014828:Vocalization, Animal