title: The ROK family regulator Rok7B7 pleiotropically affects xylose utilization, carbon catabolite repression, and antibiotic production in streptomyces coelicolor.
abstract: Members of the ROK family of proteins are mostly transcriptional regulators and kinases that generally relate to the control of primary metabolism, whereby its member glucose kinase acts as the central control protein in carbon control in Streptomyces. Here, we show that deletion of SCO6008 (rok7B7) strongly affects carbon catabolite repression (CCR), growth, and antibiotic production in Streptomyces coelicolor. Deletion of SCO7543 also affected antibiotic production, while no major changes were observed after deletion of the rok family genes SCO0794, SCO1060, SCO2846, SCO6566, or SCO6600. Global expression profiling of the rok7B7 mutant by proteomics and microarray analysis revealed strong upregulation of the xylose transporter operon xylFGH, which lies immediately downstream of rok7B7, consistent with the improved growth and delayed development of the mutant on xylose. The enhanced CCR, which was especially obvious on rich or xylose-containing media, correlated with elevated expression of glucose kinase and of the glucose transporter GlcP. In liquid-grown cultures, expression of the biosynthetic enzymes for production of prodigionines, siderophores, and calcium-dependent antibiotic (CDA) was enhanced in the mutant, and overproduction of prodigionines was corroborated by matrix-assisted laser desorption ionization-time-of-flight analysis. These data present Rok7B7 as a pleiotropic regulator of growth, CCR, and antibiotic production in Streptomyces.
authors.affiliation: Molecular Biotechnology, Institute of Biology Leiden, Leiden University, Leiden, The Netherlands.
authors.forename: Magdalena A
authors.initials: MA
authors.lastname: Świątek
authors.forename: Jacob
authors.initials: J
authors.lastname: Gubbens
authors.forename: Giselda
authors.initials: G
authors.lastname: Bucca
authors.forename: Eunjung
authors.initials: E
authors.lastname: Song
authors.forename: Yung-Hun
authors.initials: YH
authors.lastname: Yang
authors.forename: Emma
authors.initials: E
authors.lastname: Laing
authors.forename: Byung-Gee
authors.initials: BG
authors.lastname: Kim
authors.forename: Colin P
authors.initials: CP
authors.lastname: Smith
authors.forename: Gilles P
authors.initials: GP
authors.lastname: van Wezel
mesh_terms: D000900:Anti-Bacterial Agents / Q000096:biosynthesis*; D001426:Bacterial Proteins / Q000235:genetics / Q000378:metabolism*; D001692:Biological Transport / Q000235:genetics; D057465:Catabolite Repression; D004269:DNA, Bacterial / Q000235:genetics; D017353:Gene Deletion; D020869:Gene Expression Profiling; D015964:Gene Expression Regulation, Bacterial; D009154:Mutation; D010455:Peptides / Q000378:metabolism*; D010802:Phylogeny; D011353:Prodigiosin / Q000031:analogs & derivatives / Q000096:biosynthesis; D040901:Proteomics; D017262:Siderophores / Q000096:biosynthesis; D048372:Streptomyces coelicolor / Q000201:enzymology / Q000235:genetics / Q000378:metabolism*; D014158:Transcription, Genetic; D014994:Xylose / Q000378:metabolism*
chemical_list: D000900:Anti-Bacterial Agents; D001426:Bacterial Proteins; C040487:CDA antibiotic; D004269:DNA, Bacterial; D010455:Peptides; D017262:Siderophores; C010307:prodiginine; D014994:Xylose; D011353:Prodigiosin