title: Metabolomic study of Chilean biomining bacteria Acidithiobacillus ferrooxidans strain Wenelen and Acidithiobacillus thiooxidans strain Licanantay.
abstract: In this study, we present the first metabolic profiles for two bioleaching bacteria using capillary electrophoresis coupled with mass spectrometry. The bacteria, Acidithiobacillus ferrooxidans strain Wenelen (DSM 16786) and Acidithiobacillus thiooxidans strain Licanantay (DSM 17318), were sampled at different growth phases and on different substrates: the former was grown with iron and sulfur, and the latter with sulfur and chalcopyrite. Metabolic profiles were scored from planktonic and sessile states. Spermidine was detected in intra- and extracellular samples for both strains, suggesting it has an important role in biofilm formation in the presence of solid substrate. The canonical pathway for spermidine synthesis seems absent as its upstream precursor, putrescine, was not present in samples. Glutathione, a catalytic activator of elemental sulfur, was identified as one of the most abundant metabolites in the intracellular space in A. thiooxidans strain Licanantay, confirming its participation in the sulfur oxidation pathway. Amino acid profiles varied according to the growth conditions and bioleaching species. Glutamic and aspartic acid were highly abundant in intra- and extracellular extracts. Both are constituents of the extracellular matrix, and have a probable role in cell detoxification. This novel metabolomic information validates previous knowledge from in silico metabolic reconstructions based on genomic sequences, and reveals important biomining functions such as biofilm formation, energy management and stress responses. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11306-012-0443-3) contains supplementary material, which is available to authorized users.
authors: BioSigma S.A., Loteo Los Libertadores, Lote 106, Colina, Chile.
authors: Patricio
authors: P
authors: Martínez
authors: Sebastián
authors: S
authors: Gálvez
authors: Norimasa
authors: N
authors: Ohtsuka
authors: Marko
authors: M
authors: Budinich
authors: María Paz
authors: MP
authors: Cortés
authors: Cristián
authors: C
authors: Serpell
authors: Kenji
authors: K
authors: Nakahigashi
authors: Akiyoshi
authors: A
authors: Hirayama
authors: Masaru
authors: M
authors: Tomita
authors: Tomoyoshi
authors: T
authors: Soga
authors: Servet
authors: S
authors: Martínez
authors: Alejandro
authors: A
authors: Maass
authors: Pilar
authors: P
authors: Parada