title: Harnessing the theoretical foundations of the exponential and beta-Poisson dose-response models to quantify parameter uncertainty using Markov Chain Monte Carlo.
abstract: Dose-response models are the essential link between exposure assessment and computed risk values in quantitative microbial risk assessment, yet the uncertainty that is inherent to computed risks because the dose-response model parameters are estimated using limited epidemiological data is rarely quantified. Second-order risk characterization approaches incorporating uncertainty in dose-response model parameters can provide more complete information to decisionmakers by separating variability and uncertainty to quantify the uncertainty in computed risks. Therefore, the objective of this work is to develop procedures to sample from posterior distributions describing uncertainty in the parameters of exponential and beta-Poisson dose-response models using Bayes's theorem and Markov Chain Monte Carlo (in OpenBUGS). The theoretical origins of the beta-Poisson dose-response model are used to identify a decomposed version of the model that enables Bayesian analysis without the need to evaluate Kummer confluent hypergeometric functions. Herein, it is also established that the beta distribution in the beta-Poisson dose-response model cannot address variation among individual pathogens, criteria to validate use of the conventional approximation to the beta-Poisson model are proposed, and simple algorithms to evaluate actual beta-Poisson probabilities of infection are investigated. The developed MCMC procedures are applied to analysis of a case study data set, and it is demonstrated that an important region of the posterior distribution of the beta-Poisson dose-response model parameters is attributable to the absence of low-dose data. This region includes beta-Poisson models for which the conventional approximation is especially invalid and in which many beta distributions have an extreme shape with questionable plausibility.
authors: Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, 160 Research Lane, Guelph, Ontario N1G 5E2, Canada.
authors: Philip J
authors: PJ
authors: Schmidt
authors: Katarina D M
authors: KD
authors: Pintar
authors: Aamir M
authors: AM
authors: Fazil
authors: Edward
authors: E
authors: Topp
mesh_terms: D000465:Algorithms; D000818:Animals; D001499:Bayes Theorem; D002169:Campylobacter Infections / Q000453:epidemiology* / Q000517:prevention & control*; D016123:Campylobacter jejuni / Q000378:metabolism; D004305:Dose-Response Relationship, Drug; D005506:Food Contamination; D005516:Food Microbiology; D006801:Humans; D055552:Infectious Disease Medicine / Q000379:methods; D016013:Likelihood Functions; D008390:Markov Chains; D015233:Models, Statistical; D009010:Monte Carlo Method; D016012:Poisson Distribution; D011336:Probability; D015203:Reproducibility of Results; D018570:Risk Assessment / Q000379:methods*; D035501:Uncertainty
keywords: Campylobacter; quantitative microbial risk assessment (QMRA)