Prot-Prop: J-tool to predict the subcellular location of proteins based on physiochemical characterization.
PROT-PROP is a computational tool to characterize 27 physicochemical properties of a protein along with its subcellular location (intra or extra) in a single-window application. Other significant features of this software include calculation of numerical values for hydrophobicity, hydrophilicity; composition of small and large amino acids; net hydrophobic content in terms of low/high; and Navie's algorithm to calculate theoretical pI. PROT-PROP is an easy-to-install platform independent implementation of JAVA under a user-friendly interface. It is a standalone version as a virtual appliance and source code for platforms supporting Java 1.5.0 and higher versions, and downloadable from the web                    http://www.mzu.edu.in/schools/biotechnology.html                                    . PROT-PROP can run under Windows and Macintosh Operating Systems. PROT-PROP is distributed with its source code so that it may be adapted or customized, if desired.
Bioinformatics Infrastructure Facility, Department of Biotechnology, Mizoram University, Aizawl, Mizoram, India.
Brindha
B
Senthilkumar
Sangzuala
S
Sailo
Gurusubramanian
G
Guruswami
Senthilkumar
S
Nachimuthu
D000465:Algorithms; D000596:Amino Acids; D019295:Computational Biology / Q000379:methods*; D030562:Databases, Protein; D057927:Hydrophobic and Hydrophilic Interactions; D020407:Internet; D011381:Programming Languages; D011506:Proteins / Q000737:chemistry* / Q000378:metabolism; D020539:Sequence Analysis, Protein; D012984:Software; D014584:User-Computer Interface
D000596:Amino Acids; D011506:Proteins