title: PRoNTo: pattern recognition for neuroimaging toolbox.
abstract: In the past years, mass univariate statistical analyses of neuroimaging data have been complemented by the use of multivariate pattern analyses, especially based on machine learning models. While these allow an increased sensitivity for the detection of spatially distributed effects compared to univariate techniques, they lack an established and accessible software framework. The goal of this work was to build a toolbox comprising all the necessary functionalities for multivariate analyses of neuroimaging data, based on machine learning models. The "Pattern Recognition for Neuroimaging Toolbox" (PRoNTo) is open-source, cross-platform, MATLAB-based and SPM compatible, therefore being suitable for both cognitive and clinical neuroscience research. In addition, it is designed to facilitate novel contributions from developers, aiming to improve the interaction between the neuroimaging and machine learning communities. Here, we introduce PRoNTo by presenting examples of possible research questions that can be addressed with the machine learning framework implemented in PRoNTo, and cannot be easily investigated with mass univariate statistical analysis.
authors: Cyclotron Research Centre, University of Liège, Liège, Belgium.
authors: J
authors: J
authors: Schrouff
authors: M J
authors: MJ
authors: Rosa
authors: J M
authors: JM
authors: Rondina
authors: A F
authors: AF
authors: Marquand
authors: C
authors: C
authors: Chu
authors: J
authors: J
authors: Ashburner
authors: C
authors: C
authors: Phillips
authors: J
authors: J
authors: Richiardi
authors: J
authors: J
authors: Mourão-Miranda
mesh_terms: D000367:Age Factors; D000465:Algorithms; D001921:Brain / Q000502:physiology*; D001931:Brain Mapping; D003198:Computer Simulation; D006801:Humans; D007091:Image Processing, Computer-Assisted; D016013:Likelihood Functions; D015999:Multivariate Analysis; D059906:Neuroimaging; D010363:Pattern Recognition, Automated; D011237:Predictive Value of Tests; D012984:Software