title: Nozzle: a report generation toolkit for data analysis pipelines.
abstract: CONCLUSIONS
  We have developed Nozzle, an R package that provides an Application Programming Interface to generate HTML reports with dynamic user interface elements. Nozzle was designed to facilitate summarization and rapid browsing of complex results in data analysis pipelines where multiple analyses are performed frequently on big datasets. The package can be applied to any project where user-friendly reports need to be created.
  
  
  BACKGROUND
  The R package is available on CRAN at http://cran.r-project.org/package=Nozzle.R1. Examples and additional materials are available at http://gdac.broadinstitute.org/nozzle. The source code is also available at http://www.github.com/parklab/Nozzle.
  
  
  BACKGROUND
  Supplementary data are available at Bioinformatics online.
authors: Center for Biomedical Informatics, Harvard Medical School, Boston, MA 02115, USA.
authors: Nils
authors: N
authors: Gehlenborg
authors: Michael S
authors: MS
authors: Noble
authors: Gad
authors: G
authors: Getz
authors: Lynda
authors: L
authors: Chin
authors: Peter J
authors: PJ
authors: Park
mesh_terms: D019295:Computational Biology / Q000379:methods; D023281:Genomics; D006801:Humans; D009369:Neoplasms / Q000235:genetics; D011381:Programming Languages; D012984:Software; D014584:User-Computer Interface; D057188:Workflow