title: Segmenting the etiological agent of schistosomiasis for high-content screening.
abstract: Schistosomiasis is a parasitic disease with a global health impact second only to malaria. The World Health Organization has classified schistosomiasis as an illness for which new therapies are urgently needed. However, the causative parasite is refractory to current high-throughput drug screening due to the diversity and complexity of shape, appearance and movement-based phenotypes exhibited in response to putative drugs. Currently, there is no automated image-based approach capable of relieving this deficiency. We propose and validate an image segmentation algorithm designed to overcome the distinct challenges posed by schistosomes and macroparasites in general, including irregular shapes and sizes, dense groups of touching parasites and the unpredictable effects of drug exposure. Our approach combines a region-based distributing function with a novel edge detector derived from phase congruency and grayscale thinning by threshold superposition. The method is sufficiently rapid, robust and accurate to be used for quantitative analysis of diverse parasite phenotypes in high-throughput and high-content screening.
authors: Department of Chemistry and Biochemistry, San Francisco State University, San Francisco, CA 94132 USA.
authors: Daniel E
authors: DE
authors: Asarnow
authors: Rahul
authors: R
authors: Singh
mesh_terms: D000465:Algorithms; D000818:Animals; D055808:Drug Discovery; D057166:High-Throughput Screening Assays / Q000379:methods*; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D008853:Microscopy / Q000379:methods*; D015203:Reproducibility of Results; D012547:Schistosoma / Q000737:chemistry* / Q000187:drug effects / Q000302:isolation & purification; D012552:Schistosomiasis / Q000469:parasitology*; D012556:Schistosomicides / Q000494:pharmacology
chemical_list: D012556:Schistosomicides