title: Diversity and taxonomy of endophytic xylariaceous fungi from medicinal plants of Dendrobium (Orchidaceae).
abstract: Dendrobium spp. are traditional Chinese medicinal plants, and the main effective ingredients (polysaccharides and alkaloids) have pharmacologic effects on gastritis infection, cancer, and anti-aging. Previously, we confirmed endophytic xylariaceous fungi as the dominant fungi in several Dendrobium species of tropical regions from China. In the present study, the diversity, taxonomy, and distribution of culturable endophytic xylariaceous fungi associated with seven medicinal species of Dendrobium (Orchidaceae) were investigated. Among the 961 endophytes newly isolated, 217 xylariaceous fungi (morphotaxa) were identified using morphological and molecular methods. The phylogenetic tree constructed using nuclear ribosomal internal transcribed spacer (ITS), large subunit of ribosomal DNA (LSU), and beta-tubulin sequences divided these anamorphic xylariaceous isolates into at least 18 operational taxonomic units (OTUs). The diversity of the endophytic xylariaceous fungi in these seven Dendrobium species was estimated using Shannon and evenness indices, with the results indicating that the dominant Xylariaceae taxa in each Dendrobium species were greatly different, though common xylariaceous fungi were found in several Dendrobium species. These findings implied that different host plants in the same habitats exhibit a preference and selectivity for their fungal partners. Using culture-dependent approaches, these xylariaceous isolates may be important sources for the future screening of new natural products and drug discovery.
authors.affiliation: Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, People's Republic of China.
authors.forename: Juan
authors.initials: J
authors.lastname: Chen
authors.forename: Li-Chun
authors.initials: LC
authors.lastname: Zhang
authors.forename: Yong-Mei
authors.initials: YM
authors.lastname: Xing
authors.forename: Yun-Qiang
authors.initials: YQ
authors.lastname: Wang
authors.forename: Xiao-Ke
authors.initials: XK
authors.lastname: Xing
authors.forename: Da-Wei
authors.initials: DW
authors.lastname: Zhang
authors.forename: Han-Qiao
authors.initials: HQ
authors.lastname: Liang
authors.forename: Shun-Xing
authors.initials: SX
authors.lastname: Guo
mesh_terms: D044822:Biodiversity; D004271:DNA, Fungal / Q000235:genetics; D021903:DNA, Ribosomal Spacer / Q000235:genetics; D031667:Dendrobium / Q000382:microbiology*; D060026:Endophytes / Q000145:classification* / Q000235:genetics; D005658:Fungi / Q000145:classification* / Q000235:genetics; D010802:Phylogeny; D054683:Ribosome Subunits, Large, Eukaryotic / Q000235:genetics; D013045:Species Specificity; D014404:Tubulin / Q000235:genetics
chemical_list: D004271:DNA, Fungal; D021903:DNA, Ribosomal Spacer; D014404:Tubulin