title: Association of FOXP3 (rs3761548) promoter polymorphism with nondermatomal vitiligo: A study from India.
abstract: BACKGROUND
  The rs3761548 polymorphism (-3279 C>A) of FOXP3 gene is associated with several autoimmune disorders.
  
  
  OBJECTIVE
  We sought to determine whether rs3761548 polymorphism is associated with nondermatomal vitiligo in Indian subjects.
  
  
  METHODS
  Genomic DNA was isolated from blood samples of 303 patients and 305 control subjects and genotyping was done by allele-specific primers. Data analysis was carried out for the entire cohort and separately for male and female participants as FOXP3 is an X-linked marker. Statistics were performed using software.
  
  
  RESULTS
  The genotype frequencies differed significantly from patients to control subjects (P = .002). Further analysis demonstrated female participants with CC genotype were protected (CC vs CA+AA; odds ratio 0.38, 95% confidence interval 0.238-0.615) and those with CA genotype were at higher risk to develop vitiligo (CA vs CC+AA; odds ratio 2.634, 95% confidence interval 1.604-4.325). However, no such statistical difference was observed in male participants.
  
  
  CONCLUSIONS
  Our study is, to our knowledge, the first report from India with respect to vitiligo and rs3761548; however, we lack adequate literature assistance.
  
  
  CONCLUSIONS
  The rs3761548 of FOXP3 gene in our population may be associated with susceptibility to vitiligo because of altered expression. CC genotype appears to be protective and CA genotype seems to impart nearly 3-fold risk to develop vitiligo in women and girls.
authors.affiliation: Department of Genetics, Osmania University, Hyderabad, India. dr_parveenjahan@yahoo.co.in
authors.forename: Parveen
authors.initials: P
authors.lastname: Jahan
authors.forename: Rajeshwari
authors.initials: R
authors.lastname: Cheruvu
authors.forename: Surekha
authors.initials: S
authors.lastname: Tippisetty
authors.forename: Prasanna Latha
authors.initials: PL
authors.lastname: Komaravalli
authors.forename: Vijayalakshmi
authors.initials: V
authors.lastname: Valluri
authors.forename: Mohammed
authors.initials: M
authors.lastname: Ishaq
mesh_terms: D000293:Adolescent; D000328:Adult; D000483:Alleles; D016022:Case-Control Studies; D002648:Child; D016001:Confidence Intervals; D005260:Female; D051858:Forkhead Transcription Factors / Q000235:genetics*; D005787:Gene Frequency; D020022:Genetic Predisposition to Disease / Q000208:ethnology*; D005838:Genotype; D006801:Humans; D007194:India; D008297:Male; D008875:Middle Aged; D016017:Odds Ratio; D020641:Polymorphism, Single Nucleotide; D011401:Promoter Regions, Genetic; D018570:Risk Assessment; D012737:Sex Factors; D014820:Vitiligo / Q000208:ethnology* / Q000235:genetics* / Q000473:pathology; D055815:Young Adult
chemical_list: D051858:Forkhead Transcription Factors
keywords: CI; FOXP3; FOXP3 single-nucleotide polymorphism rs3761548; Indian population; OR; SNP; Tregs; X-chromosome; autoimmunity; base pair; bp; confidence interval; forkhead box P3; gender; nondermatomal; odds ratio; regulatory T cells; single-nucleotide polymorphism; vitiligo