title: [Ciliate diversity and spatiotemporal variation in surface sediments of Yangtze River estuary hypoxic zone].
abstract: By using denaturing gradient gel electrophoresis (DGGE) and sequencing as well as Ludox-QPS method, an investigation was made on the ciliate diversity and its spatiotemporal variation in the surface sediments at three sites of Yangtze River estuary hypoxic zone in April and August 2011. The ANOSIM analysis indicated that the ciliate diversity had significant difference among the sites (R = 0.896, P = 0.0001), but less difference among seasons (R = 0.043, P = 0.207). The sequencing of 18S rDNA DGGE bands revealed that the most predominant groups were planktonic Choreotrichia and Oligotrichia. The detection by Ludox-QPS method showed that the species number and abundance of active ciliates were maintained at a higher level, and increased by 2-5 times in summer, as compared with those in spring. Both the Ludox-QPS method and the DGGE technique detected that the ciliate diversity at the three sites had the similar variation trend, and the Ludox-QPS method detected that there was a significant variation in the ciliate species number and abundance between different seasons. The species number detected by Ludox-QPS method was higher than that detected by DGGE bands. Our study indicated that the ciliates in Yangtze River estuary hypoxic zone had higher diversity and abundance, with the potential to supply food for the polyps of jellyfish.
authors.affiliation: Department of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, Shandong, China. zhaofeng198710@163.com
authors.forename: Zhao
authors.initials: Z
authors.lastname: Feng
authors.forename: Xu
authors.initials: X
authors.lastname: Kui-Dong
authors.forename: Meng
authors.initials: M
authors.lastname: Zhao-Cui
mesh_terms: D000818:Animals; D044822:Biodiversity; D002681:China; D016798:Ciliophora / Q000145:classification / Q000235:genetics* / Q000254:growth & development; D058645:Denaturing Gradient Gel Electrophoresis; D063366:Estuaries; D019015:Geologic Sediments; D010100:Oxygen / Q000032:analysis*; D045483:Rivers; D037401:Scyphozoa / Q000254:growth & development; D062211:Spatio-Temporal Analysis
chemical_list: D010100:Oxygen