title: The general stress response factor EcfG regulates expression of the C-2 hopanoid methylase HpnP in Rhodopseudomonas palustris TIE-1.
abstract: Lipid molecules preserved in sedimentary rocks facilitate the reconstruction of events that have shaped the evolution of the Earth's biosphere. A key limitation for the interpretation of many of these molecular fossils is that their biological roles are still poorly understood. Here, we use Rhodopseudomonas palustris TIE-1 to identify factors that induce biosynthesis of 2-methyl hopanoids (2-MeBHPs), progenitors of 2-methyl hopanes, one of the most abundant biomarkers in the rock record. This is the first dissection of the regulation of hpnP, the gene encoding the C-2 hopanoid methylase, at the molecular level. We demonstrate that EcfG, the general stress response factor of alphaproteobacteria, regulates expression of hpnP under a variety of challenges, including high temperature, pH stress, and presence of nonionic osmolytes. Although higher hpnP transcription levels did not always result in higher amounts of total methylated hopanoids, the fraction of a particular kind of hopanoid, 2-methyl bacteriohopanetetrol, was consistently higher in the presence of most stressors in the wild type, but not in the ΔecfG mutant, supporting a beneficial role for 2-MeBHPs in stress tolerance. The ΔhpnP mutant, however, did not exhibit a growth defect under the stress conditions tested except in acidic medium. This indicates that the inability to make 2-MeBHPs under most of these conditions can readily be compensated. Although stress is necessary to regulate 2-MeBHP production, the specific conditions under which 2-MeBHP biosynthesis is essential remain to be determined.
authors.affiliation: Division of Biology, California Institute of Technology, Pasadena, California, USA.
authors.forename: Gargi
authors.initials: G
authors.lastname: Kulkarni
authors.forename: Chia-Hung
authors.initials: CH
authors.lastname: Wu
authors.forename: Dianne K
authors.initials: DK
authors.lastname: Newman
mesh_terms: D001426:Bacterial Proteins / Q000235:genetics* / Q000378:metabolism; D015964:Gene Expression Regulation, Bacterial / Q000235:genetics; D015971:Gene Expression Regulation, Enzymologic / Q000235:genetics*; D006358:Hot Temperature; D006863:Hydrogen-Ion Concentration; D008780:Methyltransferases / Q000235:genetics* / Q000378:metabolism; D008957:Models, Genetic; D005810:Multigene Family; D020133:Reverse Transcriptase Polymerase Chain Reaction; D012241:Rhodopseudomonas / Q000737:chemistry / Q000235:genetics* / Q000254:growth & development / Q000378:metabolism; D017422:Sequence Analysis, DNA; D017384:Sequence Deletion; D013312:Stress, Physiological; D014315:Triterpenes / Q000737:chemistry / Q000378:metabolism*; D015854:Up-Regulation
chemical_list: D001426:Bacterial Proteins; D014315:Triterpenes; C025206:hopane; C054760:32,33,34,35-bacteriohopanetetrol; D008780:Methyltransferases