title: A novel sensing strategy for the detection of Staphylococcus aureus DNA by using a graphene oxide-based fluorescent probe.
abstract: A novel sensing strategy for sequence-specific recognition of Staphylococcus aureus (S. aureus) DNA was designed based on the DNA hybridization between dye-labeled single-stranded DNA (ssDNA) and the complementary target DNA. Graphene oxide (GO) can adsorb FITC-labeled probes and quench the fluorescence efficiently via Förster resonance energy transfer (FRET). However, the formation of double-stranded DNA (dsDNA) will alter the conformation of ssDNA and disturb the interaction between GO and ssDNA. Thus the dsDNA-GO mixture exhibits a stronger fluorescence emission than that of the ssDNA-GO mixture, and the relative fluorescence intensity ΔI/I0 (ΔI = I(a) - I(q)) is related to the concentration of ssDNA (S. aureus DNA). Here we illustrate a "post-mixing" strategy in which the fluorescent dye-labeled DNA was allowed to hybridize with S. aureus DNA prior to the addition of GO. In this experiment, the competition between ssDNA-GO adsorption and the dsDNA formation was avoided and the incubation time was shortened to 20 min. Under the optimum conditions, the relative fluorescence intensity ΔI/I0 was proportional to the concentration of S. aureus DNA in the range 0.0125-3.125 nmol L(-1), with a detection limit of 0.00625 nmol L(-1) and good sequence selectivity.
authors.affiliation: Department of Analytical Chemistry, College of Chemistry, Jilin University, Changchun, 130012, China.
authors.forename: Shu
authors.initials: S
authors.lastname: Pang
authors.forename: Yuan
authors.initials: Y
authors.lastname: Gao
authors.forename: Yan
authors.initials: Y
authors.lastname: Li
authors.forename: Siyu
authors.initials: S
authors.lastname: Liu
authors.forename: Xingguang
authors.initials: X
authors.lastname: Su
mesh_terms: D000818:Animals; D004269:DNA, Bacterial / Q000235:genetics / Q000302:isolation & purification*; D031541:Fluorescence Resonance Energy Transfer / Q000379:methods*; D005456:Fluorescent Dyes / Q000737:chemistry*; D006108:Graphite / Q000737:chemistry*; D057230:Limit of Detection; D008892:Milk / Q000382:microbiology*; D008958:Models, Molecular; D010087:Oxides / Q000737:chemistry; D013203:Staphylococcal Infections / Q000382:microbiology; D013211:Staphylococcus aureus / Q000235:genetics* / Q000302:isolation & purification
chemical_list: D004269:DNA, Bacterial; D005456:Fluorescent Dyes; D010087:Oxides; D006108:Graphite