title: Structure determination of a bio-inspired self-assembled light-harvesting antenna by solid-state NMR and molecular modeling.
abstract: The molecular stacking of an artificial light-harvesting antenna self-assembled from 3(1)-aminofunctionalized zinc-chlorins was determined by solid-state NMR in combination with quantum-chemical and molecular-mechanics modeling. A library of trial molecular stacking arrangements was generated based on available structural data for natural and semisynthetic homologues of the Zn-chlorins. NMR assignments obtained for the monomer in solution were validated for self-assembled aggregates and refined with (1)H-(13)C heteronuclear correlation spectroscopy data collected from samples with (13)C at natural abundance. Solid-state ring-current shifts for the (1)H provided spatial constraints to determine the molecular overlap. This procedure allows for a discrimination between different self-assembled structures and a classification of the stacking mode in terms of electric dipole alignment and π-π interactions, parameters that determine the functional properties of light-harvesting assemblies and conducting nanowires. The combination with quantum-mechanical modeling then allowed building a low-resolution packing model in silico from molecular stacks. The method allows for moderate disorder and residual polymorphism at the stack or molecular level and is generally applicable to determine molecular packing structures of aromatic molecules with structural asymmetry, such as is commonly provided by functionalized side chains that serve to tune the self-assembly process.
authors.affiliation: Leiden Institute of Chemistry, Leiden University , 2300 RA, Leiden, The Netherlands.
authors.forename: Anjali
authors.initials: A
authors.lastname: Pandit
authors.forename: Kasim
authors.initials: K
authors.lastname: Ocakoglu
authors.forename: Francesco
authors.initials: F
authors.lastname: Buda
authors.forename: Thomas
authors.initials: T
authors.lastname: van Marle
authors.forename: Alfred R
authors.initials: AR
authors.lastname: Holzwarth
authors.forename: Huub J M
authors.initials: HJ
authors.lastname: de Groot
mesh_terms: D002247:Carbon Isotopes / Q000737:chemistry; D009682:Magnetic Resonance Spectroscopy; D008958:Models, Molecular; D011166:Porphyrins / Q000737:chemistry; D011789:Quantum Theory; D015032:Zinc / Q000737:chemistry
chemical_list: D002247:Carbon Isotopes; D011166:Porphyrins; C006969:chlorin; D015032:Zinc