title: Comparison of INNO-LIPA and TRUGENE assays for genotyping and drug-resistance mutations in chronic hepatitis B virus infection.
abstract: OBJECTIVE
  Hepatitis B virus (HBV) genotyping and detection of resistance to drugs have become essential in epidemiological and clinical diagnosis. Our main objective was to determine the prevalence of HBV genotypes and drug-resistance mutations in chronic asymptomatic carriers and chronic HBV sufferers comparing 2 detection assays.
  
  
  METHODS
  Serum samples from 28 chronic HBV patients and 22 chronic asymptomatic carriers were analyzed. For HBV genotyping, the INNO-LIPA and TRUGENE™ HBV genotyping kits were evaluated. For drug-resistance mutations, INNO-LIPA DR v2 and INNO-LIPA DR v3 prototype and the TRUGENE™ HBV genotyping kit were evaluated.
  
  
  RESULTS
  In HBV genotyping, concordant results were 98% and both assays were able to detect more than one genotype. Different genotypes were detected, the most prevalent being D (46%) and A (26%). In relation to drug-resistance mutations, the sensitivity of the line probe assay was lower than TRUGENE because INNO-LIPA could not detect two mutations (S202G and V214A).
  
  
  CONCLUSIONS
  Both assays are easy and suitable for detecting HBV genotype and drug-resistance mutations and for routine laboratory use. However, TRUGENE presented better sensitivity in both analyses and it is possible to conduct both on the same sample. This assay is also able to detect primary and secondary mutations.
authors.affiliation: Department of Immunology, Microbiology and Parasitology, Medicine and Odontology Faculty, University of Basque Country UPV/EHU, Leioa-Bizkaia, Spain. miren.basaras@ehu.es
authors.forename: Miren
authors.initials: M
authors.lastname: Basaras
authors.forename: Elisabete
authors.initials: E
authors.lastname: Arrese
authors.forename: Sonia
authors.initials: S
authors.lastname: Blanco
authors.forename: L Sara
authors.initials: LS
authors.lastname: Arroyo
authors.forename: Pablo
authors.initials: P
authors.lastname: Ruiz
authors.forename: Ramón
authors.initials: R
authors.lastname: Cisterna
mesh_terms: D000293:Adolescent; D000328:Adult; D000368:Aged; D000998:Antiviral Agents / Q000494:pharmacology*; D002353:Carrier State / Q000175:diagnosis / Q000821:virology; D024882:Drug Resistance, Viral; D005260:Female; D005838:Genotype; D006515:Hepatitis B virus / Q000187:drug effects* / Q000235:genetics / Q000302:isolation & purification*; D019694:Hepatitis B, Chronic / Q000175:diagnosis* / Q000821:virology*; D006801:Humans; D008297:Male; D008875:Middle Aged; D025202:Molecular Diagnostic Techniques / Q000379:methods*; D020125:Mutation, Missense; D012680:Sensitivity and Specificity; D044967:Serum / Q000821:virology; D014773:Virology / Q000379:methods; D055815:Young Adult
chemical_list: D000998:Antiviral Agents