title: Visible-light-induced photodimerization of a photoactive yellow protein (PYP) chromophore model in a single crystal.
abstract: The chromophore of the photoactive yellow protein (PYP), the photoreceptor in the photomotility of the bacterium Halorhodospira halophila, is a deprotonated para-coumaric thioester linked to the side residue of a cysteine residue. The photophysics of the PYP chromophore is conveniently modeled with para-hydroxycinnamic thiophenyl esters. Herein, we report the first direct evidence, obtained with X-ray diffraction, of photodimerization of a para-hydroxycinnamic thiophenyl ester in single crystalline state. This result represents the first direct observation of [2+2] dimerization of a model PYP chromophore, and demonstrates that even very weak light in the visible region is capable of inducing parallel radical reactions in PYP from the excited state of the chromophore, in addition to the main reaction pathway (trans-cis isomerization). This PYP model system adds an interesting example to the known solid-state photodimerizations, because unlike the anhydrous crystal (which is not capable of sustaining the stress and disintegrates in the course of photodimerization), a single water molecule "dilutes" the structure to the extent sufficient for single-crystal-to-single-crystal reaction.
authors.affiliation: The Hakubi Center for Advanced Research, Institute of Chemical Research, Kyoto University, Uji, Kyoto, 611-0011, Japan.
authors.forename: Naba K
authors.initials: NK
authors.lastname: Nath
authors.forename: Kochunnoonny
authors.initials: K
authors.lastname: Manoj
authors.forename: Andrei Şerban
authors.initials: AŞ
authors.lastname: Gâz
authors.forename: Panče
authors.initials: P
authors.lastname: Naumov
mesh_terms: D001426:Bacterial Proteins / Q000737:chemistry* / Q000378:metabolism; D018360:Crystallography, X-Ray; D004952:Esters / Q000737:chemistry; D020607:Halorhodospira halophila / Q000737:chemistry* / Q000378:metabolism; D008027:Light; D008958:Models, Molecular; D055668:Photochemical Processes; D020283:Photoreceptors, Microbial / Q000737:chemistry* / Q000378:metabolism; D055503:Protein Multimerization; D020836:Protein Structure, Quaternary
chemical_list: D001426:Bacterial Proteins; D004952:Esters; D020283:Photoreceptors, Microbial