title: Long non-coding RNAs (lncRNAs) and viral infections.
abstract: In this review, we focus on the roles of lncRNAs, including cellular and viral lncRNAs, in virus replication in infected cells. We survey the interactions and functions of several cellular lncRNAs such asXIST,HOTAIR,NEAT1,BICand several virus encoded lncRNAs.
authors: Molecular Virology Section, Laboratory of Molecular Microbiology, National Institutes of Allergy and Infectious Diseases, the National Institutes of Health, Bethesda, Maryland 20892-0460, USA.
authors: Quan
authors: Q
authors: Zhang
authors: Kuan-Teh
authors: KT
authors: Jeang
keywords: lncRNAs; virus
references: RNA Biol. 2012 Jun;9(6):703-19
references: 22664915
references: Nat Rev Genet. 2010 Sep;11(9):597-610
references: 20661255
references: Cancer Discov. 2011 Oct;1(5):391-407
references: 22096659
references: Cell Mol Life Sci. 2012 Sep;69(18):3027-36
references: 22476590
references: Development. 2005 Aug;132(15):3445-57
references: 16000384
references: J Biol Chem. 2012 Jul 27;287(31):26302-11
references: 22685290
references: Cell. 2009 Feb 20;136(4):642-55
references: 19239886
references: Genomics. 2001 Dec;78(3):206-13
references: 11735227
references: Nat Rev Mol Cell Biol. 2007 Mar;8(3):209-20
references: 17318225
references: Genetics. 1999 May;152(1):385-92
references: 10224268
references: Mol Cell. 2009 Mar 27;33(6):717-26
references: 19217333
references: Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3627-32
references: 15738415
references: PLoS Genet. 2007 Feb 2;3(2):e1
references: 17274687
references: Nature. 1982 Oct 21;299(5885):691-8
references: 6181418
references: Adv Cancer Res. 2010;107:119-36
references: 20399962
references: J Gen Virol. 2006 Jul;87(Pt 7):1991-1995
references: 16760401
references: Proc Natl Acad Sci U S A. 2009 Jul 14;106(28):11667-72
references: 19571010
references: Genes Dev. 2010 Sep 1;24(17):1832-60
references: 20810645
references: Med Res Rev. 2013 May;33(3):517-53
references: 22318902
references: Methods Mol Biol. 2010;623:35-65
references: 20217543
references: Gene. 1990 Feb 14;86(2):217-25
references: 2323574
references: Hepatology. 2011 Nov;54(5):1679-89
references: 21769904
references: Cell. 2009 Feb 20;136(4):669-87
references: 19239888
references: J Virol. 2007 Oct;81(19):10540-9
references: 17652395
references: mBio. 2010 Oct 26;1(5):
references: 20978541
references: Immunogenetics. 2009 Jan;61(1):55-70
references: 19009289
references: Nature. 2007 Jun 14;447(7146):799-816
references: 17571346
references: World J Gastroenterol. 2008 Mar 21;14(11):1652-6
references: 18350595
references: Lancet. 2004 Jan 3;363(9402):40-2
references: 14723995
references: Nat Struct Biol. 2002 Oct;9(10):740-4
references: 12244299
references: Nature. 2010 Jun 24;465(7301):1033-8
references: 20577206
references: J Cell Biol. 2009 Sep 7;186(5):637-44
references: 19720872
references: Nat Rev Genet. 2008 Jul;9(7):503-7
references: 18490927
references: J Virol. 2010 Nov;84(21):11395-406
references: 20739539
references: Genome Res. 2009 Mar;19(3):347-59
references: 19106332
references: Virol J. 2011 Nov 01;8:492
references: 22040380
references: Cell. 2002 Nov 1;111(3):393-405
references: 12419249
references: Nucleic Acids Res. 2011 Jan;39(Database issue):D146-51
references: 21112873
references: Nat Rev Genet. 2009 Mar;10(3):155-9
references: 19188922
references: Mol Cell Biol. 1997 Mar;17(3):1490-502
references: 9032277
references: Am J Transl Res. 2012;4(2):127-50
references: 22611467
references: Exp Cell Res. 2007 May 1;313(8):1639-51
references: 17376434
references: Front Genet. 2012 Jul 13;3:132
references: 22811697
references: Virology. 1970 Dec;42(4):927-37
references: 4321311
references: RNA. 2010 Aug;16(8):1478-87
references: 20587619
references: Nature. 2001 May 24;411(6836):494-8
references: 11373684
references: J Virol. 2009 Dec;83(23):12009-17
references: 19759154
references: Nat Genet. 2005 Jul;37(7):766-70
references: 15965474
references: J Virol. 2008 Nov;82(21):10436-43
references: 18753206
references: Nature. 1991 Jan 3;349(6304):38-44
references: 1985261
references: Bioessays. 2010 Jun;32(6):473-80
references: 20486133
references: Nature. 2012 Feb 15;482(7385):339-46
references: 22337053
references: Retrovirology. 2011 Jul 20;8:61
references: 21771347
references: Virus Res. 1987 Feb;7(1):17-31
references: 2436392
references: Nature. 2009 Jan 22;457(7228):413-20
references: 19158787
references: J Mol Biol. 2008 Jan 25;375(4):1098-112
references: 18067920
references: J Virol. 2005 Aug;79(15):9556-65
references: 16014917
references: Nat Rev Genet. 2009 Feb;10(2):94-108
references: 19148191
references: Cell. 2007 Jun 29;129(7):1311-23
references: 17604720
references: Genome Res. 2008 Jan;18(1):13-8
references: 18025267
references: Science. 2007 Jun 1;316(5829):1345-8
references: 17540903
references: Mol Cell Biol. 2003 Sep;23(18):6618-30
references: 12944487
references: Hepatology. 2012 Nov;56(5):1631-40
references: 22610915
references: Nature. 2007 Dec 13;450(7172):1096-9
references: 18075594
references: J Biol Chem. 2001 Jul 20;276(29):26733-6
references: 11390411
references: J Pathol. 2010 Jan;220(2):126-39
references: 19882673
references: J Cell Biol. 1983 Dec;97(6):1693-9
references: 6196367
references: J Virol. 2004 May;78(10):5133-8
references: 15113895
references: Cell. 2009 Feb 20;136(4):656-68
references: 19239887
references: J Virol. 2006 Mar;80(6):2987-99
references: 16501108
references: Nature. 2011 Feb 10;470(7333):284-8
references: 21307942
references: Nature. 2004 Oct 21;431(7011):915-6
references: 15496902
references: J Gen Virol. 1997 Jan;78 ( Pt 1):23-9
references: 9010281
references: Science. 2005 Sep 2;309(5740):1570-3
references: 16141075
references: Cell. 2009 Jan 23;136(2):215-33
references: 19167326
references: Biochim Biophys Acta. 2010 Sep;1799(9):597-615
references: 20951849
references: BMC Biol. 2012 Jun 26;10:58
references: 22734679
references: J Virol. 2010 Nov;84(22):11670-8
references: 20844043
references: Biochim Biophys Acta. 2008 Nov;1779(11):706-11
references: 18549828
references: RNA. 2010 Feb;16(2):307-15
references: 20047990
references: Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3639-44
references: 20139302
references: Biochim Biophys Acta. 2011 Nov-Dec;1809(11-12):587
references: 22055652
references: J Virol. 2003 May;77(10):5632-8
references: 12719555
references: Nat Cell Biol. 2012 Jun 10;14(7):659-65
references: 22684254
references: Nucleic Acids Res. 2009 Sep;37(17):5830-7
references: 19635730
references: Cell. 1988 Aug 26;54(5):599-607
references: 2842058
references: Science. 2010 Aug 6;329(5992):689-93
references: 20616235
references: Science. 2008 Oct 31;322(5902):750-6
references: 18974356
references: J Virol. 1991 Nov;65(11):5657-62
references: 1920611
references: EMBO J. 2007 Jun 6;26(11):2670-81
references: 17510634
references: RNA. 2005 Jan;11(1):7-13
references: 15611297
references: Mol Cell. 2009 Aug 28;35(4):467-78
references: 19716791
references: PLoS One. 2009;4(5):e5559
references: 19440381
references: Microbiology (Reading). 2007 Mar;153(Pt 3):747-59
references: 17322195
references: J Physiol Biochem. 2012 Dec;68(4):611-8
references: 22535282
references: Mol Cell. 2010 Sep 24;39(6):925-38
references: 20797886
references: J Virol. 2010 Sep;84(18):9070-7
references: 20610725
references: Nature. 2009 Mar 12;458(7235):223-7
references: 19182780
references: Eur J Biochem. 1995 Mar 15;228(3):531-50
references: 7737147
references: Genes Dev. 2006 Jun 1;20(11):1470-84
references: 16705037
references: Bioessays. 2010 Jul;32(7):599-608
references: 20544733
references: Nat Neurosci. 2009 Aug;12(8):1020-7
references: 19620975
references: Genes Dev. 2009 Jul 1;23(13):1494-504
references: 19571179
references: Nucleic Acids Res. 2012 Dec;40(22):11684-96
references: 23042677
references: J Virol. 2010 Nov;84(21):11407-17
references: 20719943
references: J Biol Chem. 2005 Jun 24;280(25):24159-67
references: 15855153
references: Nat Commun. 2010 Jul 27;1:40
references: 20975707
references: Cell Host Microbe. 2008 Dec 11;4(6):579-91
references: 19064258
references: Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2525-30
references: 19188602
references: Cold Spring Harb Symp Quant Biol. 2006;71:329-34
references: 17381313
references: J Virol. 2009 Jan;83(1):489-92
references: 18945769
references: Nucleic Acids Res. 2006 Apr 13;34(7):e53
references: 16614444
references: mBio. 2013 Jan 29;4(1):e00596-12
references: 23362321
references: J Biol Chem. 2012 Nov 30;287(49):40884-90
references: 23043098
references: J Gen Virol. 2003 Sep;84(Pt 9):2511-2516
references: 12917473
references: J Heart Lung Transplant. 2010 Mar;29(3):342-5
references: 20036157
references: Mol Cancer. 2011 Apr 13;10:38
references: 21489289
references: Nucleic Acids Res. 2007;35(21):7288-302
references: 17959647
references: J Virol. 2007 Dec;81(23):13112-24
references: 17881443