title: Fe(II) oxidation is an innate capability of nitrate-reducing bacteria that involves abiotic and biotic reactions.
abstract: Phylogenetically diverse species of bacteria can catalyze the oxidation of ferrous iron [Fe(II)] coupled to nitrate (NO(3)(-)) reduction, often referred to as nitrate-dependent iron oxidation (NDFO). Very little is known about the biochemistry of NDFO, and though growth benefits have been observed, mineral encrustations and nitrite accumulation likely limit growth. Acidovorax ebreus, like other species in the Acidovorax genus, is proficient at catalyzing NDFO. Our results suggest that the induction of specific Fe(II) oxidoreductase proteins is not required for NDFO. No upregulated periplasmic or outer membrane redox-active proteins, like those involved in Fe(II) oxidation by acidophilic iron oxidizers or anaerobic photoferrotrophs, were observed in proteomic experiments. We demonstrate that while "abiotic" extracellular reactions between Fe(II) and biogenic NO(2)(-)/NO can be involved in NDFO, intracellular reactions between Fe(II) and periplasmic components are essential to initiate extensive NDFO. We present evidence that an organic cosubstrate inhibits NDFO, likely by keeping periplasmic enzymes in their reduced state, stimulating metal efflux pumping, or both, and that growth during NDFO relies on the capacity of a nitrate-reducing bacterium to overcome the toxicity of Fe(II) and reactive nitrogen species. On the basis of our data and evidence in the literature, we postulate that all respiratory nitrate-reducing bacteria are innately capable of catalyzing NDFO. Our findings have implications for a mechanistic understanding of NDFO, the biogeochemical controls on anaerobic Fe(II) oxidation, and the production of NO(2)(-), NO, and N(2)O in the environment.
authors.affiliation: Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA.
authors.forename: Hans K
authors.initials: HK
authors.lastname: Carlson
authors.forename: Iain C
authors.initials: IC
authors.lastname: Clark
authors.forename: Steven J
authors.initials: SJ
authors.lastname: Blazewicz
authors.forename: Anthony T
authors.initials: AT
authors.lastname: Iavarone
authors.forename: John D
authors.initials: JD
authors.lastname: Coates
mesh_terms: D001426:Bacterial Proteins / Q000032:analysis; D042621:Comamonadaceae / Q000737:chemistry / Q000254:growth & development / Q000378:metabolism*; D005296:Ferrous Compounds / Q000378:metabolism*; D015964:Gene Expression Regulation, Bacterial; D053858:Metabolic Networks and Pathways; D009566:Nitrates / Q000378:metabolism*; D010084:Oxidation-Reduction; D020543:Proteome / Q000032:analysis; D026361:Reactive Nitrogen Species / Q000378:metabolism
chemical_list: D001426:Bacterial Proteins; D005296:Ferrous Compounds; D009566:Nitrates; D020543:Proteome; D026361:Reactive Nitrogen Species