title: Isothermal loop-mediated amplification (LAMP) for diagnosis of contagious bovine pleuro-pneumonia.
abstract: BACKGROUND
  Contagious Bovine Pleuropneumonia (CBPP) is the most important chronic pulmonary disease of cattle on the African continent causing severe economic losses. The disease, caused by infection with Mycoplasma mycoides subsp. mycoides is transmitted by animal contact and develops slowly into a chronic form preventing an early clinical diagnosis. Because available vaccines confer a low protection rate and short-lived immunity, the rapid diagnosis of infected animals combined with traditional curbing measures is seen as the best way to control the disease. While traditional labour-intensive bacteriological methods for the detection of M. mycoides subsp. mycoides have been replaced by molecular genetic techniques in the last two decades, these latter approaches require well-equipped laboratories and specialized personnel for the diagnosis. This is a handicap in areas where CBPP is endemic and early diagnosis is essential.
  
  
  RESULTS
  We present a rapid, sensitive and specific diagnostic tool for M. mycoides subsp. mycoides detection based on isothermal loop-mediated amplification (LAMP) that is applicable to field conditions. The primer set developed is highly specific and sensitive enough to diagnose clinical cases without prior cultivation of the organism. The LAMP assay detects M. mycoides subsp. mycoides DNA directly from crude samples of pulmonary/pleural fluids and serum/plasma within an hour using a simple dilution protocol. A photometric detection of LAMP products allows the real-time visualisation of the amplification curve and the application of a melting curve/re-association analysis presents a means of quality assurance based on the predetermined strand-inherent temperature profile supporting the diagnosis.
  
  
  CONCLUSIONS
  The CBPP LAMP developed in a robust kit format can be run on a battery-driven mobile device to rapidly detect M. mycoides subsp. mycoides infections from clinical or post mortem samples. The stringent innate quality control allows a conclusive on-site diagnosis of CBPP such as during farm or slaughter house inspections.
authors.affiliation: Genomics Unit VetCore, University of Veterinary Medicine, Vienna, Austria.
authors.forename: Georg
authors.initials: G
authors.lastname: Mair
authors.forename: Edy M
authors.initials: EM
authors.lastname: Vilei
authors.forename: Abel
authors.initials: A
authors.lastname: Wade
authors.forename: Joachim
authors.initials: J
authors.lastname: Frey
authors.forename: Hermann
authors.initials: H
authors.lastname: Unger
mesh_terms: D000818:Animals; D001483:Base Sequence; D001992:Bronchoalveolar Lavage Fluid / Q000382:microbiology; D002417:Cattle; D002418:Cattle Diseases / Q000175:diagnosis* / Q000382:microbiology; D004269:DNA, Bacterial / Q000235:genetics; D008969:Molecular Sequence Data; D009176:Mycoplasma mycoides / Q000235:genetics; D021141:Nucleic Acid Amplification Techniques / Q000379:methods / Q000662:veterinary*; D011002:Pleuropneumonia, Contagious / Q000175:diagnosis* / Q000382:microbiology; D011933:Reagent Kits, Diagnostic / Q000662:veterinary; D012680:Sensitivity and Specificity
chemical_list: D004269:DNA, Bacterial; D011933:Reagent Kits, Diagnostic