title: Practical use of BiNoM: a biological network manager software.
abstract: The Biological Network Manager (BiNoM) is a software tool for the manipulation and analysis of biological networks. It facilitates the import and conversion of a set of well-established systems biology file formats. It also provides a large set of graph-based algorithms that allow users to analyze and extract relevant subnetworks from large molecular maps. It has been successfully used in several projects related to the analysis of large and complex biological data, or networks from databases. In this tutorial, we present a detailed and practical case study of how to use BiNoM to analyze biological networks.
authors.affiliation: Institut Curie, Paris, France.
authors.forename: Eric
authors.initials: E
authors.lastname: Bonnet
authors.forename: Laurence
authors.initials: L
authors.lastname: Calzone
authors.forename: Daniel
authors.initials: D
authors.lastname: Rovera
authors.forename: Gautier
authors.initials: G
authors.lastname: Stoll
authors.forename: Emmanuel
authors.initials: E
authors.lastname: Barillot
authors.forename: Andrei
authors.initials: A
authors.lastname: Zinovyev
mesh_terms: D000465:Algorithms; D018797:Cell Cycle Proteins / Q000235:genetics* / Q000378:metabolism; D003198:Computer Simulation; D030541:Databases, Genetic; D005786:Gene Expression Regulation; D006801:Humans; D008954:Models, Biological; D016571:Neural Networks, Computer; D015398:Signal Transduction; D012984:Software; D049490:Systems Biology
chemical_list: D018797:Cell Cycle Proteins