title: Segmentation of retinal OCT images using a random forest classifier.
abstract: Optical coherence tomography (OCT) has become one of the most common tools for diagnosis of retinal abnormalities. Both retinal morphology and layer thickness can provide important information to aid in the differential diagnosis of these abnormalities. Automatic segmentation methods are essential to providing these thickness measurements since the manual delineation of each layer is cumbersome given the sheer amount of data within each OCT scan. In this work, we propose a new method for retinal layer segmentation using a random forest classifier. A total of seven features are extracted from the OCT data and used to simultaneously classify nine layer boundaries. Taking advantage of the probabilistic nature of random forests, probability maps for each boundary are extracted and used to help refine the classification. We are able to accurately segment eight retinal layers with an average Dice coefficient of 0.79 ± 0.13 and a mean absolute error of 1.21 ± 1.45 pixels for the layer boundaries.
authors.affiliation: Department of Electrical and Computer Engineering, The Johns Hopkins University, Baltimore, MD 21218.
authors.forename: Andrew
authors.initials: A
authors.lastname: Lang
authors.forename: Aaron
authors.initials: A
authors.lastname: Carass
authors.forename: Elias
authors.initials: E
authors.lastname: Sotirchos
authors.forename: Peter
authors.initials: P
authors.lastname: Calabresi
authors.forename: Jerry L
authors.initials: JL
authors.lastname: Prince
keywords: OCT; random forest classification; retinal layer segmentation