title: Prolonged fasting activates hypoxia inducible factors-1α, -2α and -3α in a tissue-specific manner in northern elephant seal pups.
abstract: Hypoxia inducible factors (HIFs) are important regulators of energy homeostasis and cellular adaptation to low oxygen conditions. Northern elephant seals are naturally adapted to prolonged periods (1-2 months) of food deprivation (fasting) which result in metabolic changes that may activate HIF-1. However, the effects of prolonged fasting on HIFs are not well defined. We obtained the full-length cDNAs of HIF-1α and HIF-2α, and partial cDNA of HIF-3α in northern elephant seal pups. We also measured mRNA and nuclear protein content of HIF-1α, -2α, -3α in muscle and adipose during prolonged fasting (1, 3, 5 & 7 weeks), along with mRNA expression of HIF-mediated genes, LDH and VEGF. HIF-1α, -2α and -3α are 2595, 2852 and 1842 bp and encode proteins of 823, 864 and 586 amino acid residues with conserved domains needed for their function (bHLH and PAS) and regulation (ODD and TAD). HIF-1α and -2α mRNA expression increased 3- to 5-fold after 7 weeks of fasting in adipose and muscle, whereas HIF-3α increased 5-fold after 7 weeks of fasting in adipose. HIF-2α protein expression was detected in nuclear fractions from adipose and muscle, increasing approximately 2-fold, respectively with fasting. Expression of VEGF increased 3-fold after 7 weeks in adipose and muscle, whereas LDH mRNA expression increased 12-fold after 7 weeks in adipose. While the 3 HIFα genes are expressed in muscle and adipose, only HIF-2α protein was detectable in the nucleus suggesting that HIF-2α may contribute more significantly in the up-regulation of genes involved in the metabolic adaptation during fasting in the elephant seal.
authors.affiliation: School of Natural Sciences, University of California, Merced, 5200 N Lake Road, Merced, CA 95343, USA. josegpeso@gmail.com
authors.forename: José G
authors.initials: JG
authors.lastname: Soñanez-Organis
authors.forename: José P
authors.initials: JP
authors.lastname: Vázquez-Medina
authors.forename: Daniel E
authors.initials: DE
authors.lastname: Crocker
authors.forename: Rudy M
authors.initials: RM
authors.lastname: Ortiz
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D051792:Basic Helix-Loop-Helix Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism; D002467:Cell Nucleus / Q000378:metabolism; D005215:Fasting; D005786:Gene Expression Regulation; D051795:Hypoxia-Inducible Factor 1, alpha Subunit / Q000737:chemistry / Q000235:genetics* / Q000378:metabolism; D007770:L-Lactate Dehydrogenase / Q000235:genetics / Q000378:metabolism; D008969:Molecular Sequence Data; D009928:Organ Specificity / Q000235:genetics; D010802:Phylogeny; D020033:Protein Isoforms; D021381:Protein Transport; D046048:Seals, Earless / Q000235:genetics* / Q000378:metabolism; D016415:Sequence Alignment; D042461:Vascular Endothelial Growth Factor A / Q000235:genetics / Q000378:metabolism
chemical_list: D051792:Basic Helix-Loop-Helix Proteins; D051795:Hypoxia-Inducible Factor 1, alpha Subunit; D007770:L-Lactate Dehydrogenase; D020033:Protein Isoforms; D042461:Vascular Endothelial Growth Factor A
keywords: ARNT; Amino-terminal transactivation domain; Aryl-hydrocarbon receptor nuclear translocator; Basic helix–loop–helix; C-TAD; Carboxyl-terminal transactivation domain; GAPDH; Gene expression; Glyceraldehyde 3-phosphate dehydrogenase; HIFs; HREs; Hypoxia inducible factor; Hypoxia inducible factors; Hypoxia-responsive elements; IH; Intermittent hypoxia; LDH; Lactate dehydrogenase; N-TAD; NLS; Northern elephant seal; Nuclear localization signal; Nuclear protein; ODD; ORF; Open reading frame; Oxygen-dependent degradation domain; PAS; PHDs; Per–Arnt–Sim; Prolonged fasting; Prolyl hydroxylases; TAD; TATA binding protein; TBP; Transactivation domain; UTRs; Untranslated regions; VEGF; Vascular endothelial grown factor; bHLH