title: CABS-fold: Server for the de novo and consensus-based prediction of protein structure.
abstract: The CABS-fold web server provides tools for protein structure prediction from sequence only (de novo modeling) and also using alternative templates (consensus modeling). The web server is based on the CABS modeling procedures ranked in previous Critical Assessment of techniques for protein Structure Prediction competitions as one of the leading approaches for de novo and template-based modeling. Except for template data, fragmentary distance restraints can also be incorporated into the modeling process. The web server output is a coarse-grained trajectory of generated conformations, its Jmol representation and predicted models in all-atom resolution (together with accompanying analysis). CABS-fold can be freely accessed at http://biocomp.chem.uw.edu.pl/CABSfold.
authors.affiliation: Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warsaw, Poland.
authors.forename: Maciej
authors.initials: M
authors.lastname: Blaszczyk
authors.forename: Michal
authors.initials: M
authors.lastname: Jamroz
authors.forename: Sebastian
authors.initials: S
authors.lastname: Kmiecik
authors.forename: Andrzej
authors.initials: A
authors.lastname: Kolinski
mesh_terms: D000465:Algorithms; D020407:Internet; D011487:Protein Conformation; D012984:Software