title: Broad distribution of diverse anaerobic ammonium-oxidizing bacteria in chinese agricultural soils.
abstract: Anaerobic ammonium-oxidizing (anammox) bacteria have been detected in many marine and freshwater ecosystems. However, little is known about the distribution, diversity, and abundance of anammox bacteria in terrestrial ecosystems. In this study, anammox bacteria were found to be present in various agricultural soils collected from 32 different locations in China. Phylogenetic analysis of the 16S rRNA genes showed "Candidatus Brocadia," "Candidatus Kuenenia," "Candidatus Anammoxoglobus," and "Candidatus Jettenia" in the collected soils, with "Candidatus Brocadia" being the dominant genus. Quantitative PCR showed that the abundance of anammox bacteria ranged from 6.38 × 10(4) ± 0.42 × 10(4) to 3.69 × 10(6) ± 0.25 × 10(6) copies per gram of dry weight. Different levels of diversity, composition, and abundance of the anammox bacterial communities were observed, and redundancy analysis indicated that the soil organic content and the distribution of anammox communities were correlated in the soils examined. Furthermore, Pearson correlation analysis showed that the diversity of the anammox bacteria was positively correlated with the soil ammonium content and the organic content, while the anammox bacterial abundance was positively correlated with the soil ammonium content. These results demonstrate the broad distribution of diverse anammox bacteria and its correlation with the soil environmental conditions within an extensive range of Chinese agricultural soils.
authors.affiliation: Department of Environmental Engineering, Zhejiang University, Hangzhou, China.
authors.forename: Li-Dong
authors.initials: LD
authors.lastname: Shen
authors.forename: Shuai
authors.initials: S
authors.lastname: Liu
authors.forename: Li-Ping
authors.initials: LP
authors.lastname: Lou
authors.forename: Wei-Ping
authors.initials: WP
authors.lastname: Liu
authors.forename: Xiang-Yang
authors.initials: XY
authors.lastname: Xu
authors.forename: Ping
authors.initials: P
authors.lastname: Zheng
authors.forename: Bao-Lan
authors.initials: BL
authors.lastname: Hu
mesh_terms: D064751:Ammonium Compounds / Q000378:metabolism*; D001421:Bacteria, Anaerobic / Q000145:classification* / Q000235:genetics* / Q000378:metabolism; D058491:Bacterial Load; D044822:Biodiversity; D002681:China; D016000:Cluster Analysis; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D008969:Molecular Sequence Data; D010084:Oxidation-Reduction; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D060888:Real-Time Polymerase Chain Reaction; D017422:Sequence Analysis, DNA; D012988:Soil Microbiology
chemical_list: D064751:Ammonium Compounds; D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D012336:RNA, Ribosomal, 16S