title: TASUKE: a web-based visualization program for large-scale resequencing data.
abstract: CONCLUSIONS
  Because an enormous amount of sequence data is being collected, a method to effectively display sequence variation information is urgently needed. tasuke is a web application that visualizes large-scale resequencing data generated by next-generation sequencing technologies and is suitable for rapid data release to the public on the web. The variation and read depths of multiple genomes, as well as annotations, can be shown simultaneously at various scales. We demonstrate the use of TASUKE by applying it to 50 rice and 100 human genome resequencing datasets.
  
  
  METHODS
  The tasuke program package and user manual are available from http://tasuke.dna.affrc.go.jp/.
  
  
  BACKGROUND
  taitoh@affrc.go.jp.
authors.affiliation: Bioinformatics Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan.
authors.forename: Masahiko
authors.initials: M
authors.lastname: Kumagai
authors.forename: Jungsok
authors.initials: J
authors.lastname: Kim
authors.forename: Ryutaro
authors.initials: R
authors.lastname: Itoh
authors.forename: Takeshi
authors.initials: T
authors.lastname: Itoh
mesh_terms: D003196:Computer Graphics; D014644:Genetic Variation; D015894:Genome, Human; D018745:Genome, Plant; D059014:High-Throughput Nucleotide Sequencing / Q000379:methods*; D006801:Humans; D020407:Internet; D012275:Oryza / Q000235:genetics; D020641:Polymorphism, Single Nucleotide; D012984:Software