title: Mucins as diagnostic and prognostic biomarkers in a fish-parasite model: transcriptional and functional analysis.
abstract: Mucins are O-glycosylated glycoproteins present on the apex of all wet-surfaced epithelia with a well-defined expression pattern, which is disrupted in response to a wide range of injuries or challenges. The aim of this study was to identify mucin gene sequences of gilthead sea bream (GSB), to determine its pattern of distribution in fish tissues and to analyse their transcriptional regulation by dietary and pathogenic factors. Exhaustive search of fish mucins was done in GSB after de novo assembly of next-generation sequencing data hosted in the IATS transcriptome database (www.nutrigroup-iats.org/seabreamdb). Six sequences, three categorized as putative membrane-bound mucins and three putative secreted-gel forming mucins, were identified. The transcriptional tissue screening revealed that Muc18 was the predominant mucin in skin, gills and stomach of GSB. In contrast, Muc19 was mostly found in the oesophagus and Muc13 was along the entire intestinal tract, although the posterior intestine exhibited a differential pattern with a high expression of an isoform that does not share a clear orthologous in mammals. This mucin was annotated as intestinal mucin (I-Muc). Its RNA expression was highly regulated by the nutritional background, whereas the other mucins, including Muc2 and Muc2-like, were expressed more constitutively and did not respond to high replacement of fish oil (FO) by vegetable oils (VO) in plant protein-based diets. After challenge with the intestinal parasite Enteromyxum leei, the expression of a number of mucins was decreased mainly in the posterior intestine of infected fish. But, interestingly, the highest down-regulation was observed for the I-Muc. Overall, the magnitude of the changes reflected the intensity and progression of the infection, making mucins and I-Muc, in particular, reliable markers of prognostic and diagnostic value of fish intestinal health.
authors.affiliation: Nutrigenomics and Fish Growth Endocrinology Group, Instituto de Acuicultura Torre de la Sal (IATS-CSIC), Castellón, Spain. jperez@iats.csic.es
authors.forename: Jaume
authors.initials: J
authors.lastname: Pérez-Sánchez
authors.forename: Itziar
authors.initials: I
authors.lastname: Estensoro
authors.forename: María José
authors.initials: MJ
authors.lastname: Redondo
authors.forename: Josep Alvar
authors.initials: JA
authors.lastname: Calduch-Giner
authors.forename: Sadasivam
authors.initials: S
authors.lastname: Kaushik
authors.forename: Ariadna
authors.initials: A
authors.lastname: Sitjà-Bobadilla
mesh_terms: D000824:Animal Nutritional Physiological Phenomena / Q000502:physiology*; D000818:Animals; D001483:Base Sequence; D015415:Biomarkers / Q000378:metabolism*; D016000:Cluster Analysis; D017931:DNA Primers / Q000235:genetics; D030541:Databases, Genetic; D005395:Fish Oils; D041981:Gastrointestinal Tract / Q000378:metabolism; D005786:Gene Expression Regulation / Q000502:physiology*; D005880:Gills / Q000378:metabolism; D059014:High-Throughput Nucleotide Sequencing; D006790:Host-Parasite Interactions; D008969:Molecular Sequence Data; D009077:Mucins / Q000235:genetics*; D010802:Phylogeny; D010938:Plant Oils; D060888:Real-Time Polymerase Chain Reaction; D021541:Sea Bream / Q000378:metabolism* / Q000469:parasitology*; D012867:Skin / Q000378:metabolism
chemical_list: D015415:Biomarkers; D017931:DNA Primers; D005395:Fish Oils; D009077:Mucins; D010938:Plant Oils