title: A functional (E)-4-hydroxy-3-methylbut-2-enyl diphosphate reductase exhibits diurnal regulation of expression in Stevia rebaudiana (Bertoni).
abstract: The leaves of stevia [Stevia rebaudiana (Bertoni)] are a rich source of steviol glycosides that are used as non-calorific sweetener in many countries around the world. Steviol moiety of steviol glycosides is synthesized via plastidial 2C-methyl-D-erythritol 4-phosphate pathway, where (E)-4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HDR) is the key enzyme. HDR catalyzes the simultaneous conversion of (E)-4-hydroxy-3-methylbut-2-enyl diphosphate into five carbon isoprenoid units, isopentenyl diphosphate and dimethylallyl diphosphate. Stevia HDR (SrHDR) successfully rescued HDR lethal mutant strain MG1655 ara<>ispH upon genetic complementation, suggesting SrHDR to encode a functional protein. The gene exhibited diurnal variation in expression. To identify the possible regulatory elements, upstream region of the gene was cloned and putative cis-acting elements were detected by in silico analysis. Electrophoretic mobility shift assay, using a putative light responsive element GATA showed the binding of nuclear proteins (NP) isolated from leaves during light period of the day, but not with the NP from leaves during the dark period. Data suggested the involvement of GATA box in light mediated gene regulation of SrHDR in stevia.
authors.affiliation: Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology, Palampur 176061, Himachal Pradesh, India. hitesh_biotech@hotmail.com
authors.forename: Hitesh
authors.initials: H
authors.lastname: Kumar
authors.forename: Sanjay
authors.initials: S
authors.lastname: Kumar
mesh_terms: D002940:Circadian Rhythm; D024202:Electrophoretic Mobility Shift Assay; D015870:Gene Expression; D015971:Gene Expression Regulation, Enzymologic; D018506:Gene Expression Regulation, Plant; D005816:Genetic Complementation Test; D010088:Oxidoreductases / Q000235:genetics* / Q000378:metabolism; D010802:Phylogeny; D018515:Plant Leaves / Q000201:enzymology* / Q000235:genetics; D011401:Promoter Regions, Genetic; D020218:Response Elements; D036625:Stevia / Q000201:enzymology* / Q000235:genetics
chemical_list: D010088:Oxidoreductases
keywords: (E)-4-hydroxy-3-methylbut-2-enyl diphosphate reductase; 2C-methyl-D-erythritol 4-phosphate; 4-(cytidine 5′ diphospho)-2C-methyl-D-erythritol kinase; 4-(cytidine 5′ diphospho)-2C-methyl-D-erythritol synthase; A. thaliana; Arabidopsis thaliana; CAB; CMK; E. coli; EMSA; Escherichia coli; GAP; HDR; IPTG; IRGA; Infra-red gas analyzer; LB; Luria Bertani; MCT; MEGA; MEP; MEP pathway; Molecular Evolutionary Genetics Analysis; NP; PCR; PLACE; Plant Cis-acting Regulatory DNA Elements; Promoter; RBCS; RT-PCR; SDS; SGs; SOPMA; Self-Optimized Prediction Method with Alignment; SrHDR; SrMDS; Stevia rebaudiana; Stevia rebaudiana 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Stevia rebaudiana HDR; base pair; bp; cDNA; chlorophyll a/b binding protein; complementary DNA; electrophoretic mobility shift assay; glyceraldydyde-3-phosphate dehydrogenase; isopropyl β-D-1-thiogalactopyranoside; nuclear proteins; polymerase chain reaction; reverse transcriptase-polymerase chain reaction; ribulose-1,5-bisphosphate carboxylase; sodium dodecyl sulfate; steviol glycosides