title: Rate equation approach to understanding the ion-catalyzed formation of peptides.
abstract: The salt-induced peptide formation is important for assessing and approaching schemes of molecular evolution. Here, we present experimental data and an exactly solvable kinetic model describing the linear polymerization of L-glutamic amino acid in water solutions with different concentrations of KCl and NaCl. The length distributions of peptides are well fitted by the model. Strikingly, we find that KCl considerably enhances the peptide yield, while NaCl does not show any catalytic effect in most cases under our experimental conditions. The greater catalytic effect of potassium ions is entirely interpreted by one and single parameter, the polymerization rate constant that depends on the concentration of a given salt in the reaction mixture. We deduce numeric estimates for the rate constant at different concentrations of the ions and show that it is always larger for KCl. This leads to an exponential increase of the potassium- to sodium-catalyzed peptide concentration ratio with length. Our results show that the ion-catalyzed peptides have a higher probability to emerge in excess potassium rather than in sodium-rich water solutions.
authors.affiliation: St. Petersburg Academic University, Nanotechnology Research and Education Centre RAS, 8∕3 Khlopina str., St. Petersburg 194021, Russia. dubrovskii@mail.ioffe.ru
authors.forename: V G
authors.initials: VG
authors.lastname: Dubrovskii
authors.forename: N V
authors.initials: NV
authors.lastname: Sibirev
authors.forename: I E
authors.initials: IE
authors.lastname: Eliseev
authors.forename: S Yu
authors.initials: SY
authors.lastname: Vyazmin
authors.forename: V M
authors.initials: VM
authors.lastname: Boitsov
authors.forename: Yu V
authors.initials: YV
authors.lastname: Natochin
authors.forename: M V
authors.initials: MV
authors.lastname: Dubina
mesh_terms: D000596:Amino Acids / Q000737:chemistry; D002384:Catalysis; D007477:Ions / Q000737:chemistry; D007700:Kinetics; D015394:Molecular Structure; D010455:Peptides / Q000138:chemical synthesis* / Q000737:chemistry; D011189:Potassium Chloride / Q000737:chemistry*; D012965:Sodium Chloride / Q000737:chemistry*
chemical_list: D000596:Amino Acids; D007477:Ions; D010455:Peptides; D012965:Sodium Chloride; D011189:Potassium Chloride