title: The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
abstract: BACKGROUND
  Genlisea aurea (Lentibulariaceae) is a carnivorous plant with unusually small genome size - 63.6 Mb - one of the smallest known among higher plants. Data on the genome sizes and the phylogeny of Genlisea suggest that this is a derived state within the genus. Thus, G. aurea is an excellent model organism for studying evolutionary mechanisms of genome contraction.
  
  
  RESULTS
  Here we report sequencing and de novo draft assembly of G. aurea genome. The assembly consists of 10,687 contigs of the total length of 43.4 Mb and includes 17,755 complete and partial protein-coding genes. Its comparison with the genome of Mimulus guttatus, another representative of higher core Lamiales clade, reveals striking differences in gene content and length of non-coding regions.
  
  
  CONCLUSIONS
  Genome contraction was a complex process, which involved gene loss and reduction of lengths of introns and intergenic regions, but not intron loss. The gene loss is more frequent for the genes that belong to multigenic families indicating that genetic redundancy is an important prerequisite for genome size reduction.
authors.forename: Evgeny V
authors.initials: EV
authors.lastname: Leushkin
authors.forename: Roman A
authors.initials: RA
authors.lastname: Sutormin
authors.forename: Elena R
authors.initials: ER
authors.lastname: Nabieva
authors.forename: Aleksey A
authors.initials: AA
authors.lastname: Penin
authors.forename: Alexey S
authors.initials: AS
authors.lastname: Kondrashov
authors.forename: Maria D
authors.initials: MD
authors.lastname: Logacheva
mesh_terms: D005075:Biological Evolution; D055028:Comparative Genomic Hybridization; D021901:DNA, Intergenic / Q000235:genetics; D018744:DNA, Plant / Q000235:genetics; D059646:Genome Size; D018745:Genome, Plant; D007438:Introns; D019684:Magnoliopsida / Q000235:genetics*; D058977:Molecular Sequence Annotation; D010802:Phylogeny; D017422:Sequence Analysis, DNA; D059467:Transcriptome
chemical_list: D021901:DNA, Intergenic; D018744:DNA, Plant