title: An efficient nonlinear finite-difference approach in the computational modeling of the dynamics of a nonlinear diffusion-reaction equation in microbial ecology.
abstract: In this manuscript, we present a computational model to approximate the solutions of a partial differential equation which describes the growth dynamics of microbial films. The numerical technique reported in this work is an explicit, nonlinear finite-difference methodology which is computationally implemented using Newton's method. Our scheme is compared numerically against an implicit, linear finite-difference discretization of the same partial differential equation, whose computer coding requires an implementation of the stabilized bi-conjugate gradient method. Our numerical results evince that the nonlinear approach results in a more efficient approximation to the solutions of the biofilm model considered, and demands less computer memory. Moreover, the positivity of initial profiles is preserved in the practice by the nonlinear scheme proposed.
authors.affiliation: Departamento de Matemáticas y Física, Universidad Autónoma de Aguascalientes, Aguascalientes 20131, Mexico. Electronic address: jemacias@correo.uaa.mx.
authors.forename: J E
authors.initials: JE
authors.lastname: Macías-Díaz
authors.forename: Siegfried
authors.initials: S
authors.lastname: Macías
authors.forename: I E
authors.initials: IE
authors.lastname: Medina-Ramírez
mesh_terms: D001419:Bacteria / Q000145:classification / Q000254:growth & development / Q000378:metabolism*; D018441:Biofilms; D019295:Computational Biology; D003198:Computer Simulation; D004058:Diffusion; D017753:Ecosystem; D008954:Models, Biological; D017711:Nonlinear Dynamics
keywords: 65M06; 92B05; 92D25; 92D40; Computational model; Finite-difference method; Mathematical ecology; Microbial film; Nonlinear modeling