title: Fast dictionary-based reconstruction for diffusion spectrum imaging.
abstract: Diffusion spectrum imaging reveals detailed local diffusion properties at the expense of substantially long imaging times. It is possible to accelerate acquisition by undersampling in q-space, followed by image reconstruction that exploits prior knowledge on the diffusion probability density functions (pdfs). Previously proposed methods impose this prior in the form of sparsity under wavelet and total variation transforms, or under adaptive dictionaries that are trained on example datasets to maximize the sparsity of the representation. These compressed sensing (CS) methods require full-brain processing times on the order of hours using MATLAB running on a workstation. This work presents two dictionary-based reconstruction techniques that use analytical solutions, and are two orders of magnitude faster than the previously proposed dictionary-based CS approach. The first method generates a dictionary from the training data using principal component analysis (PCA), and performs the reconstruction in the PCA space. The second proposed method applies reconstruction using pseudoinverse with Tikhonov regularization with respect to a dictionary. This dictionary can either be obtained using the K-SVD algorithm, or it can simply be the training dataset of pdfs without any training. All of the proposed methods achieve reconstruction times on the order of seconds per imaging slice, and have reconstruction quality comparable to that of dictionary-based CS algorithm.
authors.forename: Berkin
authors.initials: B
authors.lastname: Bilgic
authors.forename: Itthi
authors.initials: I
authors.lastname: Chatnuntawech
authors.forename: Kawin
authors.initials: K
authors.lastname: Setsompop
authors.forename: Stephen F
authors.initials: SF
authors.lastname: Cauley
authors.forename: Anastasia
authors.initials: A
authors.lastname: Yendiki
authors.forename: Lawrence L
authors.initials: LL
authors.lastname: Wald
authors.forename: Elfar
authors.initials: E
authors.lastname: Adalsteinsson
mesh_terms: D000465:Algorithms; D001921:Brain / Q000033:anatomy & histology / Q000502:physiology; D016208:Databases, Factual; D056324:Diffusion Tensor Imaging / Q000379:methods*; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D025341:Principal Component Analysis