title: Metabolic profiling of human follicular fluid identifies potential biomarkers of oocyte developmental competence.
abstract: The use of metabolomic based techniques to aid oocyte and embryo selection has gained attention in recent years. Previous work from our laboratory has demonstrated that the (1)H NMR-based metabolic profile of follicular fluid correlates with oocyte developmental potential. Patients undergoing IVF at the Merrion Fertility Clinic had follicular fluid collected at the time of oocyte retrieval. The fatty acid composition of follicular fluid from follicles where oocytes fertilised and developed into multi-cell embryos (n=15) and from oocytes that fertilised normally but failed to cleave (n=9) (cleaved vs non-cleaved) was compared. Statistical analysis was performed on the data using univariate and multivariate techniques. Analysis of the fatty acid composition revealed that there were nine fatty acids significantly different between follicular fluid from the cleaved and the non-cleaved sample groups. Of particular interest were the higher concentration of total saturated (P=0.03) and the lower concentration of total polyunsaturated fatty acids in the non-cleaved sample group (P=0.001). Random forest classification models were used to predict successful cleavage in follicular fluid samples producing models with errors rates of <10%. Receiver operating characteristic analysis demonstrated that the model had good predictability with an area under the curve of 0.96. The panel of fatty acid biomarkers identified in this study indicates that the fatty acid composition of follicular fluid may be more predictive in comparison to other previously identified biomarkers. Following validation in a larger cohort, these biomarkers may have the potential to be used in fertility clinics to aid the selection of oocytes in the future.
authors.affiliation: UCD School of Agriculture and Food Science, UCD Conway Institute, Belfield, Dublin, Ireland.
authors.forename: A
authors.initials: A
authors.lastname: O'Gorman
authors.forename: M
authors.initials: M
authors.lastname: Wallace
authors.forename: E
authors.initials: E
authors.lastname: Cottell
authors.forename: M J
authors.initials: MJ
authors.lastname: Gibney
authors.forename: F M
authors.initials: FM
authors.lastname: McAuliffe
authors.forename: M
authors.initials: M
authors.lastname: Wingfield
authors.forename: L
authors.initials: L
authors.lastname: Brennan
mesh_terms: D000328:Adult; D019540:Area Under Curve; D015415:Biomarkers / Q000378:metabolism*; D005227:Fatty Acids / Q000378:metabolism*; D005260:Female; D015571:Follicular Fluid / Q000378:metabolism*; D008401:Gas Chromatography-Mass Spectrometry; D006801:Humans; D009682:Magnetic Resonance Spectroscopy; D055432:Metabolomics; D009865:Oocytes / Q000166:cytology* / Q000378:metabolism*; D012372:ROC Curve
chemical_list: D015415:Biomarkers; D005227:Fatty Acids