title: Splicing variants of SERPINA1 gene in ovine milk: characterization of cDNA and identification of polymorphisms.
abstract: The serine protease inhibitor, clade A, member 1 (SERPINA1) is the gene for a protein called alpha-1-antitrypsin (AAT), which is a member of the serine protease inhibitor (serpin) superfamily of proteins. By conformational change, serpins control several chemical reactions inhibiting the activity of proteases. AAT is the most abundant endogenous serpin in blood circulation and it is present in relatively high concentration in human milk as well as in bovine and porcine colostrum. Here we report for the first time the molecular characterization and sequence variability of the ovine SERPINA1 cDNA and gene. cDNAs from mammary gland and from milk were PCR amplified, and three different transcripts (1437, 1166 and 521bp) of the SERPINA1 gene were identified. We amplified and sequenced different regions of the gene (5' UTR, from exon 2 to exon 5 and 3' UTR), and we found that the exon-intron structure of the gene is similar to that of human and bovine. We detected a total of 97 SNPs in cDNAs and gene sequences from 10 sheep of three different breeds. In adult sheep tissues a SERPINA1 gene expression analysis indicated a differential expression of the three different transcripts. The finding reported in this paper will aid further studies on possible involvement of the SERPINA1 gene in different physiological states and its possible association with production traits.
authors.affiliation: Consiglio per la Ricerca e la sperimentazione in Agricoltura - CRA, PCM, Animal Production Research Centre, Monterotondo, Italy.
authors.forename: Cinzia
authors.initials: C
authors.lastname: Marchitelli
authors.forename: Alessandra
authors.initials: A
authors.lastname: Crisà
authors.forename: Elisa
authors.initials: E
authors.lastname: Mostarda
authors.forename: Francesco
authors.initials: F
authors.lastname: Napolitano
authors.forename: Bianca
authors.initials: B
authors.lastname: Moioli
mesh_terms: D020121:5' Untranslated Regions; D000483:Alleles; D017398:Alternative Splicing; D000595:Amino Acid Sequence; D019943:Amino Acid Substitution; D000818:Animals; D019295:Computational Biology; D018076:DNA, Complementary / Q000235:genetics; D008892:Milk; D008969:Molecular Sequence Data; D009928:Organ Specificity / Q000235:genetics; D011110:Polymorphism, Genetic; D020641:Polymorphism, Single Nucleotide; D059368:RNA Isoforms; D016415:Sequence Alignment; D034561:Sheep, Domestic / Q000235:genetics* / Q000378:metabolism; D000515:alpha 1-Antitrypsin / Q000235:genetics*
chemical_list: D020121:5' Untranslated Regions; D018076:DNA, Complementary; D059368:RNA Isoforms; D000515:alpha 1-Antitrypsin