title: Theoretical study of novel complexed structures for methoxy derivatives of scytonemin: potential biomarkers in iron-rich stressed environments.
abstract: Scytonemin is a cyanobacterial sheath pigment with potent UV (UVA, UVB, and UVC) absorbing properties. Di- and tetramethoxy derivatives of scytonemin have also been found and described in the literature. The importance of these biomolecules is their photoprotective function, which is one of the major survival strategies adopted by extremophiles in environmentally stressed conditions. Also, iron compounds [particularly iron(III) oxides] offer an additional UV-protecting facility to subsurface endolithic biological colonization; hence, banded iron formations (accompanied by zones of depletion of iron) in rock matrices have attracted attention with special interest in the method of transportation of iron compounds through the rock. Di- and tetramethoxyscytonemin and their iron(III) complexes have been modeled and studied computationally by using density functional theory calculations at the level of B3LYP/6-31G** methodology. We propose new structures that could feature in survival strategy and facilitate the movement of iron through the rock especially for iron-rich stressed terrestrial environments exemplified by the Río Tinto system with the added potential of subsurface Mars exploration. This study represents a continuation of our previous work on scytonemin. The calculated Raman spectra of the proposed iron complexes are compared with those of their parent compounds and discussed in relation to structural changes effected in the parent ligand upon complexation. This information leads to new insights to be gained by experimental Raman spectroscopists and the characterization of spectroscopic biosignatures for the database being compiled for the remote Raman analytical interrogation of the martian surface and subsurface being proposed for the ESA ExoMars mission planned for launch in 2018.
authors.affiliation: 1 Department of Chemistry, Bogazici University , Istanbul, Turkey .
authors.forename: Tereza
authors.initials: T
authors.lastname: Varnali
authors.forename: Howell G M
authors.initials: HG
authors.lastname: Edwards
mesh_terms: D000864:Antarctic Regions; D015415:Biomarkers / Q000032:analysis*; D018559:Exobiology; D005118:Extraterrestrial Environment / Q000737:chemistry*; D007211:Indoles / Q000737:chemistry*; D007501:Iron / Q000032:analysis*; D018535:Mars; D008697:Methane / Q000737:chemistry*; D008962:Models, Theoretical; D008968:Molecular Conformation; D010636:Phenols / Q000737:chemistry*; D013059:Spectrum Analysis, Raman
chemical_list: D015415:Biomarkers; D007211:Indoles; D010636:Phenols; C083368:scytonemin; D007501:Iron; D008697:Methane