title: Using information theory to assess the communicative capacity of circulating microRNA.
abstract: The discovery of extracellular microRNAs (miRNAs) and their transport modalities (i.e., microparticles, exosomes, proteins and lipoproteins) has sparked theories regarding their role in intercellular communication. Here, we assessed the information transfer capacity of different miRNA transport modalities in human serum by utilizing basic principles of information theory. Zipf Statistics were calculated for each of the miRNA transport modalities identified in human serum. Our analyses revealed that miRNA-mediated information transfer is redundant, as evidenced by negative Zipf's Statistics with magnitudes greater than one. In healthy subjects, the potential communicative capacity of miRNA in complex with circulating proteins was significantly lower than that of miRNA encapsulated in circulating microparticles and exosomes. Moreover, the presence of coronary heart disease significantly lowered the communicative capacity of all circulating miRNA transport modalities. To assess the internal organization of circulating miRNA signals, Shannon's zero- and first-order entropies were calculated. Microparticles (MPs) exhibited the lowest Shannon entropic slope, indicating a relatively high capacity for information transfer. Furthermore, compared to the other miRNA transport modalities, MPs appeared to be the most efficient at transferring miRNA to cultured endothelial cells. Taken together, these findings suggest that although all transport modalities have the capacity for miRNA-based information transfer, MPs may be the simplest and most robust way to achieve miRNA-based signal transduction in sera. This study presents a novel method for analyzing the quantitative capacity of miRNA-mediated information transfer while providing insight into the communicative characteristics of distinct circulating miRNA transport modalities.
authors.affiliation: Division of Cardiology, Emory University School of Medicine, Atlanta, GA 30322, United States.
authors.forename: Nnenna A
authors.initials: NA
authors.lastname: Finn
authors.forename: Charles D
authors.initials: CD
authors.lastname: Searles
mesh_terms: D000328:Adult; D002450:Cell Communication; D055252:Cell-Derived Microparticles / Q000378:metabolism; D003327:Coronary Disease / Q000235:genetics / Q000378:metabolism*; D055354:Exosomes / Q000378:metabolism; D005260:Female; D061307:Human Umbilical Vein Endothelial Cells; D006801:Humans; D007257:Information Theory; D008074:Lipoproteins / Q000378:metabolism; D008297:Male; D035683:MicroRNAs / Q000235:genetics / Q000378:metabolism*; D008875:Middle Aged; D034443:RNA Transport
chemical_list: D008074:Lipoproteins; D035683:MicroRNAs
keywords: Coronary heart disease; Exosomes; Extracellular miRNA; Information theory; Microparticles