title: [Characterization of genotypes for Burkholderia cepacia complex strains isolated from patients in hospitals of Russian Federation].
abstract: 88 cultures of microorganisms referred to the Burkholderia cepacia complex (Bcc) during initial identification were analyzed by multilocus sequencing (Multilocus Sequence Typing, MLST). 13 genotypes (sequence type, ST) were detected, 9 of them (708, 709, 710, 711, 712, 714, 727, 728, 729) were identified for the first time. Two new alleles for the gene trpB (357, 358), one of the genes atpD (306) and gltB (352) were detected and registered. It was found that strains of 2 genotypes (711, 712) belong to the species B. multivorans, 1 (ST102) - B. contaminans, 1 (ST51) - B. stabilis, 1 (ST729) - B. vietnamiensis. Most strains of the sample, representing 8 genotypes (208, 241, 728, 727, 708, 709, 710, 714), belong to the species B. cenocepacia. Identified genotypes differ in the global spread of the world: 4 genotype (51, 102, 208, 241) have intercontinental distribution, 1 (712) - intra. It is shown that strains causing nosocomial infections, in most cases refer to genotypes 728 and 708. Epidemiologically significant in respect of patients with cystic fibrosis should recognize genotype 709, detected in strains isolated from patients in seven federal districts (FD) of Russia. The Bcc strains of genotypes 241 (B. cenocepacia) and 729 (B. vietnamiensis) were isolated from the patients of the Far Eastern FD. They are not typical for other FD Russia. The possibility of concomitant infection in cystic fibrosis patient with two genotypes 709 - epidemiologically significant and 708 - nosocomial, was indicated. The long-termpersistence of a single genotype strain in the organism of patients with cystic fibrosis was demonstrated as for Bcc species B. cenocepacia (ST 709), so for B. multivorans (ST712). The possibility of transferring the strain Bcc, typical for nosocomial environment to patient with cystic fibrosis at surgery was observed.
authors.affiliation: Gamaleya Scientific Research Institute of Epidemiology and Microbiology, Ministry of Health and Social Development, Moscow, Russia
authors.forename: A L
authors.initials: AL
authors.lastname: Voronina
authors.forename: M Yu
authors.initials: MY
authors.lastname: Chernukha
authors.forename: I A
authors.initials: IA
authors.lastname: Shaginyan
authors.forename: M S
authors.initials: MS
authors.lastname: Kunda
authors.forename: L R
authors.initials: LR
authors.lastname: Avetisyan
authors.forename: A A
authors.initials: AA
authors.lastname: Orlova
authors.forename: V G
authors.initials: VG
authors.lastname: Lunin
authors.forename: L V
authors.initials: LV
authors.lastname: Avakyan
authors.forename: N I
authors.initials: NI
authors.lastname: Kapranov
authors.forename: E L
authors.initials: EL
authors.lastname: Amelina
authors.forename: A G
authors.initials: AG
authors.lastname: Chuchalin
authors.lastname: Gintsburg A L
mesh_terms: D000483:Alleles; D019121:Burkholderia Infections / Q000150:complications / Q000453:epidemiology / Q000382:microbiology*; D042602:Burkholderia cepacia complex / Q000235:genetics* / Q000302:isolation & purification / Q000472:pathogenicity; D003550:Cystic Fibrosis / Q000150:complications / Q000382:microbiology; D005798:Genes, Bacterial; D005838:Genotype; D006761:Hospitals; D006801:Humans; D012426:Russia / Q000453:epidemiology