title: Bacterial diversity and composition of an alkaline uranium mine tailings-water interface.
abstract: The microbial diversity and biogeochemical potential associated with a northern Saskatchewan uranium mine water-tailings interface was examined using culture-dependent and -independent techniques. Morphologically-distinct colonies from uranium mine water-tailings and a reference lake (MC) obtained using selective and non-selective media were selected for 16S rRNA gene sequencing and identification, revealing that culturable organisms from the uranium tailings interface were dominated by Firmicutes and Betaproteobacteria; whereas, MC organisms mainly consisted of Bacteroidetes and Gammaproteobacteria. Ion Torrent (IT) 16S rRNA metagenomic analysis carried out on extracted DNA from tailings and MC interfaces demonstrated the dominance of Firmicutes in both of the systems. Overall, the tailings-water interface environment harbored a distinct bacterial community relative to the MC, reflective of the ambient conditions (i.e., total dissolved solids, pH, salinity, conductivity, heavy metals) dominating the uranium tailings system. Significant correlations among the physicochemical data and the major bacterial groups present in the tailings and MC were also observed. Presence of sulfate reducing bacteria demonstrated by culture-dependent analyses and the dominance of Desulfosporosinus spp. indicated by Ion Torrent analyses within the tailings-water interface suggests the existence of anaerobic microenvironments along with the potential for reductive metabolic processes.
authors.affiliation: Food and Bioproduct Sciences, University of Saskatchewan, Saskatoon, SK, Canada.
authors.forename: Nurul H
authors.initials: NH
authors.lastname: Khan
authors.forename: Viorica F
authors.initials: VF
authors.lastname: Bondici
authors.forename: Prabhakara G
authors.initials: PG
authors.lastname: Medihala
authors.forename: John R
authors.initials: JR
authors.lastname: Lawrence
authors.forename: Gideon M
authors.initials: GM
authors.lastname: Wolfaardt
authors.forename: Jeff
authors.initials: J
authors.lastname: Warner
authors.forename: Darren R
authors.initials: DR
authors.lastname: Korber
mesh_terms: D001419:Bacteria / Q000145:classification* / Q000235:genetics* / Q000302:isolation & purification; D001431:Bacteriological Techniques; D058448:Biota; D016000:Cluster Analysis; D003470:Culture Media / Q000737:chemistry; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D004783:Environmental Microbiology; D008969:Molecular Sequence Data; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012525:Saskatchewan; D017422:Sequence Analysis, DNA; D014501:Uranium; D014867:Water
chemical_list: D003470:Culture Media; D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D012336:RNA, Ribosomal, 16S; D014867:Water; D014501:Uranium
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