Computational models of the JAK1/2-STAT1 signaling.
Despite a conceptually simple mechanism of signaling, the JAK-STAT pathway exhibits considerable behavioral complexity. Computational pathway models are tools to investigate in detail signaling process. They integrate well with experimental studies, helping to explain molecular dynamics and to state new hypotheses, most often about the structure of interactions. A relatively small amount of experimental data is available for a JAK1/2-STAT1 variant of the pathway, hence, only several computational models were developed. Here we review a dominant approach of kinetic modeling of the JAK1/2-STAT1 pathway, based on ordinary differential equations. We also give a brief overview of attempts to computationally infer topology of this pathway.
Institute of Informatics; University of Warsaw; Warsaw, Poland ; Mossakowski Medical Research Centre; Polish Academy of Sciences; Warsaw, Poland.
Anna
A
Gambin
Agata
A
Charzyńska
Aleksandra
A
Ellert-Miklaszewska
Mikołaj
M
Rybiński
IFN signaling; JAK1/2-STAT1 pathway; computational model; kinetics; mathematical modeling; network inference